DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sphinx1 and CG30087

DIOPT Version :10

Sequence 1:NP_729255.2 Gene:sphinx1 / 318005 FlyBaseID:FBgn0052383 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_725489.2 Gene:CG30087 / 246446 FlyBaseID:FBgn0050087 Length:277 Species:Drosophila melanogaster


Alignment Length:272 Identity:58/272 - (21%)
Similarity:116/272 - (42%) Gaps:47/272 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VVTLLVLSLTVSVGEKNKLSPRIAGGYRAKTFTIIYLVGIVYFKSQTSSLNYGAGTIISNQWILT 68
            :|....|:....|..:::.:.|:..|..|...:..::|.:.     .:||.:..|:|:::::|||
  Fly    20 IVDAQFLNPLCGVTYESQTAMRVVNGKEAVIRSAPFMVYVT-----NNSLTHCGGSILNSRYILT 79

  Fly    69 ----VKTVLKYSYIEVHLASRRSYRG---------FDIIRIYKENFRFHYDNDHV--IALVKCPY 118
                |...|:....|.::.:....:|         :.|::..  ..||:...:||  |||:|...
  Fly    80 AAHCVFPNLRLRLGEHNIRTDPDCQGSNCSPRSEEYGIMKAI--THRFYNAANHVNDIALLKLNR 142

  Fly   119 Q-KFDRRMDRVRV---PAYDTRFERYVGNMTMVCGYGTEKRHAKLPEWMRCIEVEVMNNTECAK- 178
            . .|:..:..:.:   ||.......|     ...|:|..|::. .|..::..|:...:...|:: 
  Fly   143 SINFNVHIQPICILLNPASAPSVATY-----QTFGWGETKKNG-FPHLLQTAELRAYDAAYCSRS 201

  Fly   179 YYTPLKWYEMCTSGEGFKGVCEGDIGGAVVTMGPNPTF--------IGIIWLMPENCSIGYPSVH 235
            ::..:...::| :|...:..|.||.||.:||   ...|        :||:...|.:|.  .|.|:
  Fly   202 FHAYMNGNQIC-AGHEERDTCAGDSGGPLVT---RVDFDGVKRYLQLGIVSYGPTDCQ--SPGVY 260

  Fly   236 IRVSDHIKWIKR 247
            ..|.::|.||:|
  Fly   261 TYVPNYINWIRR 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sphinx1NP_729255.2 Tryp_SPc 25..245 CDD:473915 52/247 (21%)
CG30087NP_725489.2 Tryp_SPc 42..272 CDD:238113 53/248 (21%)

Return to query results.
Submit another query.