DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32373 and ltbp3

DIOPT Version :9

Sequence 1:NP_001261534.1 Gene:CG32373 / 318000 FlyBaseID:FBgn0052373 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001244070.1 Gene:ltbp3 / 562912 ZFINID:ZDB-GENE-060526-130 Length:1258 Species:Danio rerio


Alignment Length:532 Identity:123/532 - (23%)
Similarity:178/532 - (33%) Gaps:205/532 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LKRAKDNALYCSNGIWLGLKPNCIKIGKG---------NTHSMKQKKMRCRIDNGGCAHICNR-- 137
            :...|.|:..|.:|:       |.....|         .:|::.:   ||..:|...|..|.|  
Zfish   478 MDECKLNSNICGHGV-------CANTQNGFMCHCYPGYRSHALTK---RCEDENECDAQPCGRGV 532

  Fly   138 -----STHKCECYEGYTLN--STDLRSCNDIDECKESN-GGCSQVCNNLPGEFICTCNSGFEIDE 194
                 .::||.|:.||.|:  |:..|||:||:||..:. .|....|.|..|.:.|.|..||....
Zfish   533 CLNVLGSYKCNCHHGYRLSEISSGKRSCSDINECLNTEICGVGGQCINQQGSYKCECLPGFRKKI 597

  Fly   195 SDEKTCLDIDECADPELSWDC-TAGCKNLNGTYKCLP-----------------------SLVGR 235
            .....|.||:||.:|::   | ...|:|..|:|:|||                       .|.||
Zfish   598 QKPPHCEDINECLEPDI---CPNEQCENTLGSYECLPCQPGYRAERGVCHDIDECKKHGVCLNGR 659

  Fly   236 VEPTDG-------DGFSP---------------------GEIV---------CKSGFKLSDDGSE 263
            .|...|       :||.|                     |..:         |.:|::.:.:||.
Zfish   660 CENLAGSYRCLCNEGFLPEANRKGCRDINECQDNRLCANGHCINTDGSFRCQCYAGYQPTQEGSH 724

  Fly   264 CQDINECDLADIDSDSWRMTYRYCEH-KCENTVGSYICHCPQGYHL-----LDDQNSC------- 315
            |:|||||..|           ..|:. :|.||:|||.|.|.:||.|     ..|.|.|       
Zfish   725 CEDINECKRA-----------ANCQRGRCINTMGSYRCECQKGYTLENGRHCKDINECDGERSLC 778

  Fly   316 ----------------ILDGSKLPPSKDAPVSQEAPRKDICPLFKGPANGKASCDKYLQNGFNYT 364
                            ..||.:|...|.:....|:.:|: |.|   ..:....||..|..  |.|
Zfish   779 QPHGVCENRQGGYVCVCNDGFRLSEDKHSCEKIESDKKE-CYL---NLDDTVFCDSVLAT--NVT 837

  Fly   365 RCNITCNAGYIMQGSQFAVCGHTGLWSSPEAKCVESLALSCPVLTPPRNGR-FY----------- 417
            :....|:.| :..|.      |..::..|..:..|..:| ||:      || ||           
Zfish   838 KQECCCSIG-VGWGD------HCEIYPCPVYRSAEYHSL-CPI------GRGFYHDQEKIEYGFV 888

  Fly   418 -----------------PASC-NNEP------------SKSLAIC--------ELLCDRGYL--P 442
                             ...| |.:|            ..:|..|        |.||..|:.  .
Zfish   889 AHRDIDECVLFSNEICKEGRCMNTQPGFECYCQQGFYYDSNLLECIDVDECHDESLCINGHCVNT 953

  Fly   443 RMDTQLICAAPW 454
            |.....:|..||
Zfish   954 RGSFYCVCDPPW 965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32373NP_001261534.1 FXa_inhibition 124..158 CDD:291342 13/42 (31%)
vWFA <158..199 CDD:294047 13/41 (32%)
FXa_inhibition 287..315 CDD:291342 14/33 (42%)
CCP 340..398 CDD:153056 12/57 (21%)
ltbp3NP_001244070.1 EGF_CA 290..>320 CDD:214542
TB 348..382 CDD:279073
EGF_CA 562..594 CDD:214542 11/31 (35%)
EGF_CA 605..640 CDD:214542 13/37 (35%)
EGF_CA 645..>675 CDD:214542 5/29 (17%)
EGF_CA 686..726 CDD:214542 5/39 (13%)
EGF_CA 727..766 CDD:214542 18/49 (37%)
EGF_CA 767..809 CDD:214542 7/41 (17%)
TB 828..865 CDD:279073 10/45 (22%)
EGF_CA 935..>965 CDD:214542 6/29 (21%)
EGF_CA 982..1012 CDD:214542
EGF_CA 1038..>1064 CDD:214542
TB <1109..1135 CDD:279073
EGF_CA 1209..>1243 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
10.960

Return to query results.
Submit another query.