DRSC/TRiP Functional Genomics Resources

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Protein Alignment Crag and Sbf1

DIOPT Version :9

Sequence 1:NP_001162710.2 Gene:Crag / 31800 FlyBaseID:FBgn0025864 Length:1671 Species:Drosophila melanogaster
Sequence 2:XP_006521601.1 Gene:Sbf1 / 77980 MGIID:1925230 Length:1901 Species:Mus musculus


Alignment Length:1316 Identity:275/1316 - (20%)
Similarity:440/1316 - (33%) Gaps:411/1316 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 EILLRYPTFDHTDFPLNLCPSVPLFCLPMGASLEAWPHVNGTEKRKPISPVFSTFVLTVSD-GTY 269
            :||.|:|..|..|.|..  ..:.|||.|.|..|        ..:|.|  |.|  ||..::| .:.
Mouse    26 QILQRFPEKDWEDNPFP--QGIELFCQPSGWQL--------CPERNP--PTF--FVAVLTDINSE 76

  Fly   270 KVYGSALTFYEDYDESKL-----SAEQKELLGWDEEFGAQHS------------LHMIKAICLLS 317
            :.|.:.|||:|..:.::.     :|.:||    :|..|...:            |...|.:.|:|
Mouse    77 RHYCACLTFW
EPVESTQEVVCTDNATEKE----EEADGGGQARLSSTAPAQPGQLFAPKTLVLVS 137

  Fly   318 HHPFGDTFDKWLKYLHRMVLYDVNIPIPVERYITQLLD-EVPFPAPSIHLQLSS----------E 371
            .....:.|...|..::.:.:..:|:.:  |..|..||. .||....|   ||.|          .
Mouse   138 RLDHAEVFRNSLGLIYAIHVEGLNVSL--ENVIGNLLTCTVPLAGGS---QLDSVEEGARTISLG 197

  Fly   372 SNDRILLTQPEDSPLPRSGAGFHILLQNLGTDNCLHVLLLALTEQKILIHSLRPATLTAVAEAIV 436
            :.||.::..|....||.|.....:|.:.||..|.|.:...||||.|:|..|.....|......::
Mouse   198 AGDRQVIQTPLVDSLPVSRCSVALLFRQLGITNVLSLFCAALTEHKVLFLSRSYQRLADACRGLL 262

  Fly   437 SLLFPFKWQCPYIPLCPLGLAEVLHAPLPYLIGVDSRFFDLYEPPTDVTCIDLDTNNISLCESQR 501
            :||||.::...|:|:.|..|.|||..|.|::|||::.|....:...||...|||...:::.|.. 
Mouse   263 ALLFPLRYSFTYVPILPAQLLEVLSTPTPFIIGVNAAFQAETQELLDVIVADLDGGTVTVPECV- 326

  Fly   502 HLS--PKLLPKRAARLLRQTL-TELENAK---PISYDSTNSL---DRDIRKRKRELVLEQRIQEA 557
            |:.  |:.|..:...:|...| .|||.|.   |....|.:||   |:::|             ..
Mouse   327 HIPPLPEPLQSQTHNVLSMVLDPELELADLAFPPPTTSASSLKMQDKELR-------------AV 378

  Fly   558 FLLFMASILRGYRDFLVPISKAPSVGATDPSALFQLKAFLRSRDKSHQKFFELMMKTQMFIRFIE 622
            ||...|.:|:|||..|..:...|     :|...|...|||..|......|...:::...|..|:.
Mouse   379 FLRLFAQLLQGYRWCLHIVRIHP-----EPVIRFHKAAFLGQRGLVEDDFLMKVLEGMAFAGFVS 438

  Fly   623 ERSFVSDGDHGLSF-----FDE-CAEKVGNYDETPAQLHLVDWDTGQNSERTKYIFPPDSVTPAG 681
            ||        |:.:     ||| .|.:|.......:..|.|   .....|..:.::..::..||.
Mouse   439 ER--------GVPYRATDLFDELVAHEVARMRADESHPHRV---LRHVQELAEQLYKNENPYPAV 492

  Fly   682 S----QPGGGGGGLAYNYENFTLQPELLQST----------KKTALSKFLQLQLNASLSPGSPIA 732
            :    |..|....|...:..|   |.|.:.|          |.......::.:..:::..|.|:.
Mouse   493 AMHKVQRPGEASHLRRTHRPF---PRLDEGTIQWIVDQAAAKMQGAPPAVKAERRSTVPSGPPMT 554

  Fly   733 RRTKHEIKLSQKMASRCQQHPEAWSKYLLATCYSLYFLILPSMVLDPRHAGKEPEILRAAYDVLV 797
                       .:..|| ..|...|...|....:....:....:|:.:..  .|.:|||   :..
Mouse   555 -----------AILERC-SGPHINSARRLEVVRNCISYVFEGKMLEAKKL--LPAVLRA---LKG 602

  Fly   798 RASRLKITCDEFCYRIMMQLCGIHNLPVLAVRLHYLMKRSGVQANALTYGFYNR---CVLESQWP 859
            ||:|   .|                   ||..||..::::....:...:.|..|   |.|     
Mouse   603 RAAR---RC-------------------LAHELHLHVQQNRAVLDHQQFDFVVRMMNCCL----- 640

  Fly   860 QDSTTISQIRWNRIKNVVL------------GAAQFRKAGKQRAASKVNKSLSASQDQ------- 905
            ||.|::.:   :.|.:.:|            |..||       |.|.|.:.:..|..|       
Mouse   641 QDCTSLDE---HGIASALLPLVTAFCRKLSPGVTQF-------AYSCVQEHVVWSTPQFWEAMFY 695

  Fly   906 -NLST------LETVDGQS---RTSLASSSGDGGGHGLLDFAAFDR------LRNKLGSIVRQTV 954
             ::.|      ||..||.|   .|..|.|..|  ....||.|:..|      .|.|...:|::..
Mouse   696 GDVQTHIRALYLEPSDGVSPTQETGEAQSQDD--ERSALDVASEQRRLWPTLSREKQQELVQKEE 758

  Fly   955 TGGNNETMGDAVNNTGLLIPGELSAPN--TPTYG-GDTEILAKALQQQQPRKQIMSIGGG---DD 1013
            :...::.:..|...:.||:|.:.|...  ....| ||.|..:.:|...       |:.|.   ..
Mouse   759 STVFSQAIHYANRMSYLLLPLDSSKSRLLRERAGLGDLESASNSLVTN-------SMAGSVAESY 816

  Fly  1014 DDEDEDEDEYT---------------------AGSPSTPQKQLEAGADDLEYAGGGDYEADEEDE 1057
            |.|...||..|                     :|..|...|.|.....|:               
Mouse   817 DTESGFEDAETCDVAGAVVRFINRFVDKVCTESGVTSDHLKGLHVMVPDI--------------- 866

  Fly  1058 DEVDEHV----AAQRARQR---VQSPTKISPR--------------------------------- 1082
              |..|:    |..|..:|   :|.|..:.||                                 
Mouse   867 --VQMHIETLEAVHRESKRLPPIQKPKLLRPRLLPGEECVLDGLRVYLLPDGREEGVGGSGGGPA 929

  Fly  1083 ----------------------------TPVTQNDPLGALNEEESAASATPTQETQQEQQHSQS- 1118
                                        ..|.::.|:.||.:|:..:..||..:..|:....:| 
Mouse   930 LLPAEGAVFLTTYRVIFTGMPTDPLVGEQVVVRSFPVAALTKEKRISVQTPVDQLLQDGLQLRSC 994

  Fly  1119 -------QIDSSIYSDKPILFRGQRSATFDESTQIGKSMHRSETMPVASSGVTNSLANIGSSLKF 1176
                   ..|..:.||...|||              |.:|:....|           :|.::..|
Mouse   995 TFQLLKMAFDEEVGSDSAELFR--------------KQLHKLRYPP-----------DIRATFAF 1034

  Fly  1177 TFG-RYSPARLSLKKDLKLPANIIENISSISPSLTGKKSNELIQGSLSSIKSAANSLTKKFDEIK 1240
            |.| .::|.|                    .|.:|..|.......|.:.:|:|..::.:::    
Mouse  1035 TLGSAHTPGR--------------------PPRVTKDKGPSFRTLSRNLMKNAKKTIGRQY---- 1075

  Fly  1241 GVISANSTPTKTNNGHHPHGLHHGHHHPHHHHHHHSQHGNAEQEEHDAAVHEEGKLRRVSSDLDP 1305
                      .|...::|.|..|....|            .|.:|.:.:|.||.:    .|.|.|
Mouse  1076 ----------VTRKKYNPPGWEHRGQPP------------PEDQEDEISVSEELE----PSTLTP 1114

  Fly  1306 WGRLSESRKSSYNNLV 1321
            ...|..|.:.:.::||
Mouse  1115 SSALKPSDRMTMSSLV 1130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CragNP_001162710.2 uDENN 189..279 CDD:214824 23/73 (32%)
DENN 308..492 CDD:307995 57/194 (29%)
dDENN 551..624 CDD:129037 18/72 (25%)
PPR repeat 808..837 CDD:276811 4/28 (14%)
Sbf1XP_006521601.1 uDENN 1..86 CDD:214824 23/73 (32%)
DENN 129..318 CDD:214823 57/193 (30%)
dDENN 372..440 CDD:129037 20/85 (24%)
SBF2 551..772 CDD:372054 54/276 (20%)
PH-like 901..1019 CDD:388408 16/131 (12%)
PTP_DSP_cys 1158..1530 CDD:391942
PH_Sbf1_hMTMR5 1794..1899 CDD:269941
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2127
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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