Sequence 1: | NP_001162710.2 | Gene: | Crag / 31800 | FlyBaseID: | FBgn0025864 | Length: | 1671 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005159157.1 | Gene: | dennd4a / 558211 | ZFINID: | ZDB-GENE-060503-285 | Length: | 1724 | Species: | Danio rerio |
Alignment Length: | 1822 | Identity: | 647/1822 - (35%) |
---|---|---|---|
Similarity: | 941/1822 - (51%) | Gaps: | 260/1822 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MEEK--RIADYFVVAGMPENPQLLQENSFNDSGRLRAATTIE-PITDIGVYFPLLGEEVPEGYEI 62
Fly 63 LSHTPTGLQANLNHGSVRTTDCYIYFRRGKDRPPLVDIGVLYDGHERIMSDAEIVAETPGGRVAN 127
Fly 128 VNNSSA-KTFLTYRRARADMPCNELVVTELCVIVQSKGERAPHAFCLIYKTLNKGYVGSDVYLCY 191
Fly 192 KKSMYRPKHISYKPEILLRYPTFDHTDFPLNLCPSVPLFCLPMGASLEAWPHVNGTEKRKPISPV 256
Fly 257 FSTFVLTVSDGTYKVYGSALTFYEDYDESKLSAEQKELLGWDEEF---GAQHSLHMIKAICLLSH 318
Fly 319 HPFGDTFDKWLKYLHRMVLYDVNIP--IPVERYITQLLDEVPFPA---PSIHLQLSSESNDRILL 378
Fly 379 TQPEDSPLPRSGAGFHILLQNLGTDNCLHVLLLALTEQKILIHSLRPATLTAVAEAIVSLLFPFK 443
Fly 444 WQCPYIPLCPLGLAEVLHAPLPYLIGVDSRFFDLYEPPTDVTCIDLDTNNISLCESQRHLSPKLL 508
Fly 509 PKRAARLLRQTLTELENAKPISYDST---NSLDRDIRKR------KRELVLEQRIQEAFLLFMAS 564
Fly 565 ILRGYRDFLVPISKAPSVGATDPSALFQLKAFLRSRDKSHQKFFELMMKTQMFIRFIEERSFVSD 629
Fly 630 GDHGLSFFDECAEKV------GNYD-ETPAQLHLVDWDTGQNSERTKYIFPPD-SVTPAGSQPGG 686
Fly 687 GGGGLAYNYENF-TLQPEL------LQSTKKTALSKFLQLQLNASLSPGSPIA--RRTKHEIKLS 742
Fly 743 QKMASRCQQHPEAWSKYLLATCYSLYFLILPSMVLDPRHAGKEPEILRAAYDVLVRASRLKI-TC 806
Fly 807 DEFCYRIMMQLCGIHNLPVLAVRLHYLMKRSGVQANALTYGFYNRCVLESQWPQDSTTISQIRWN 871
Fly 872 RIKNVVLGAAQFRKAGKQRAASKVNKSLSASQDQNLSTLETVDGQSRTSLASSSGDGGGHGLLDF 936
Fly 937 AAFDRLRNKLGSIVRQTVTGGNNETMGDAVNNTGLLIPGELSAPNTPTYGGDTEILAK------- 994
Fly 995 ALQQQQPRKQIMSIGGGDDDDE--DEDEDEYTAGSPSTPQKQLEAGADDLEYAGGGDYEADEED- 1056
Fly 1057 --EDEVDEHVAAQ---RARQRVQSPTKIS------------------------------------ 1080
Fly 1081 --PRTPVTQN-DPLGAL-------NEEESAASATPTQETQQEQQHSQSQIDSSIYSDKPILFRGQ 1135
Fly 1136 RSATFDESTQIGKSMHRSETM-------PVASSGVTNSLANIGSSLKFTFGRYSPARLSLKKDLK 1193
Fly 1194 LPANIIENISSISPSLTGKKSNELIQGSL----SSIKSAANSLTKKFDEIKGVISANSTPTKTNN 1254
Fly 1255 GHHPHGLHHGHHHPHHHHHHHSQHGNAEQE-----EHDAAVHEEGKLRRVSSDLDPWGRLSESRK 1314
Fly 1315 SSYNNLVPLGENSSTGALHMHAFPAVP---------------DNLYSLTSENAADRDCDVLIQLT 1364
Fly 1365 TCSQCHNCSVLVYDEEIMSGWTAEDSNLNTTCHACNKLTVPFLSVQI------ER---------Q 1414
Fly 1415 VEESEQSDPLQDGKEQIAN-GNSHKTSLTVPYLNPLVLRKELENILTQEGDIALIKPEFVDEHPI 1478
Fly 1479 IYWNLLWLMERIESKTHLPEL-------CLPVPSDKEHIDPLSKVKTVHIQCLWDNLSLHTEASG 1536
Fly 1537 PPMYLLYRETQPTSPLIKALLTDQAQLNKNVIQQIISAIRCNDFATPLK---RLANERHKLKSNG 1598
Fly 1599 VERSHSFYRDILFLALTAIGRSNVDLATFHREYAAVFDKLTERECNMYYRNQDLPPSASTIFCRA 1663
Fly 1664 YF 1665 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Crag | NP_001162710.2 | uDENN | 189..279 | CDD:214824 | 45/89 (51%) |
DENN | 308..492 | CDD:307995 | 104/188 (55%) | ||
dDENN | 551..624 | CDD:129037 | 50/72 (69%) | ||
PPR repeat | 808..837 | CDD:276811 | 17/28 (61%) | ||
dennd4a | XP_005159157.1 | DUF2464 | 44..>198 | CDD:287242 | 74/153 (48%) |
uDENN | 168..275 | CDD:214824 | 59/114 (52%) | ||
DENN | 307..491 | CDD:280329 | 104/188 (55%) | ||
dDENN | 559..632 | CDD:129037 | 50/72 (69%) | ||
PPR_2 | 816..856 | CDD:289786 | 23/39 (59%) | ||
PPR repeat | 818..847 | CDD:276811 | 17/28 (61%) | ||
PPR | 819..853 | CDD:273253 | 19/33 (58%) | ||
SEEEED | 921..1003 | CDD:291463 | 17/93 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 214 | 1.000 | Domainoid score | I2686 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H55933 | |
Inparanoid | 1 | 1.050 | 932 | 1.000 | Inparanoid score | I342 |
OMA | 1 | 1.010 | - | - | QHG46628 | |
OrthoDB | 1 | 1.010 | - | - | D47872at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001463 | |
OrthoInspector | 1 | 1.000 | - | - | otm24522 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102394 | |
Panther | 1 | 1.100 | - | - | O | PTHR12296 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3728 |
SonicParanoid | 1 | 1.000 | - | - | X917 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.970 |