Sequence 1: | NP_001162710.2 | Gene: | Crag / 31800 | FlyBaseID: | FBgn0025864 | Length: | 1671 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008764615.1 | Gene: | Dennd4a / 315756 | RGDID: | 1562639 | Length: | 1873 | Species: | Rattus norvegicus |
Alignment Length: | 1974 | Identity: | 684/1974 - (34%) |
---|---|---|---|
Similarity: | 973/1974 - (49%) | Gaps: | 416/1974 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MEEK--RIADYFVVAGMPENPQLLQEN-SFNDSGRLRAATTIEPITDIGVYFPLLGEEVPEGYEI 62
Fly 63 LSHTPTGLQANLNHGSVRTTDCYIYFRRGKDRPPLVDIGVLYDGHERIMSDAEIVAETPGGRVAN 127
Fly 128 V--NNSSAKTFLTYRRARADMPCNELVVTELCVIVQSKGERAPHAFCLIYKTLNKGYVGSDVYLC 190
Fly 191 YKKSMYRPKHISYKPEILLRYPTFDHTDFPLNLCPSVPLFCLPMGASLEAWPHVNGTEKRKPISP 255
Fly 256 VFSTFVLTVSDGTYKVYGSALTFYEDYDESKLSAEQKELLGW----DEEFGAQHSLHMIKAICLL 316
Fly 317 SHHPFGDTFDKWLKYLHRMVLYDVNIP--IPVERYITQLLDEVPFPAPS---IHLQLSSESNDRI 376
Fly 377 LLTQPEDSPLPRSGAGFHILLQNLGTDNCLHVLLLALTEQKILIHSLRPATLTAVAEAIVSLLFP 441
Fly 442 FKWQCPYIPLCPLGLAEVLHAPLPYLIGVDSRFFDLYEPPTDVTCIDLDTNNISLCESQRHLSPK 506
Fly 507 LLPKRAARLLRQTLTELEN--AKPISYDSTNSL------DRDIRKRKRELVLEQRIQEAFLLFMA 563
Fly 564 SILRGYRDFLVPISKAPSVGATDPSALFQLKAFLRSRDKSHQKFFELMMKTQMFIRFIEERSFVS 628
Fly 629 DGDHGLSFFDECAEKVGNYDETPAQLHLVDWDTGQNSERTKYIFPPD-SVTPAGSQPGGGGGGLA 692
Fly 693 YNYENFTL-------QPE-LLQSTKKTALSKFLQLQLNASLSPG--SPIARRTKHEIKLSQKMAS 747
Fly 748 RCQQHPEAWSKYLLATCYSLYFLILPSMVLDPRHAGKEPEILRAAYDVLVRASRLKI-TCDEFCY 811
Fly 812 RIMMQLCGIHNLPVLAVRLHYLMKRSGVQANALTYGFYNRCVLESQWPQDSTTISQIRWNRIKNV 876
Fly 877 VLGAAQFRKAGK------QRAASKVNKSLSAS----QDQNLSTLETVD--------GQSRTSLAS 923
Fly 924 SSGDGGGHGLLDFAAFDRLRNKLGSIVRQTVTG--GNNETMGDAVNNTG--LLIPG---ELSAPN 981
Fly 982 TPT------YGGDTEILAKALQQQQP-RKQIMSIGGG----------DDDDEDEDEDEYTAG--- 1026
Fly 1027 ------SPSTPQKQLEAG-------ADDLEYAGGGD---YEA-------------DEEDED-EVD 1061
Fly 1062 EH----VAAQRAR--QRVQSPTKISPRTP---VTQNDPLGAL--------------NEEESAASA 1103
Fly 1104 TPT------QETQQEQQHSQS-------QIDSSIYSDK-------PILFRGQRSATFDEST---- 1144
Fly 1145 --QIGKSMHRSETMP---VASS-----------GVTNSLANIGSSLKFTFGRYSPARLSLKKDLK 1193
Fly 1194 LPA--NIIENISS----ISPSLTGKKSNELIQGSLSSIKSAANSLTKKFDEIKGVISANSTPTKT 1252
Fly 1253 NNGHHPHGLHHGHHHPHHHHHHHSQHGNAEQEEHDAAVHEEGKLRRVSSDLDPWGRLSESRKSSY 1317
Fly 1318 NNLVPLGENSS-TGALHMHAFPAVPDNLYSLTSENA---ADRDCDVLIQLTTCSQCHNCSVLVYD 1378
Fly 1379 EEIMSGWTAEDSNLNTTCHACNKLTVPFLSVQI-------------------------------- 1411
Fly 1412 -------------------------ERQVEESEQSDPLQ-------------------------- 1425
Fly 1426 -------DGKEQIANGNSHKT------------------SLTVPYLNPLVLRKELENILTQEGDI 1465
Fly 1466 ALIKPEFVDEHPIIYWNLLWLMERIESKTHLPELCLPVPSDKEHIDPLSKV---------KTVHI 1521
Fly 1522 QCLWDNLSLHTEASGPPMYLLYR----------ETQPTSPLIKALLTDQAQLNKNVIQQIISAIR 1576
Fly 1577 CNDFATPLKRLANERHKLKSNGVERSHSFYRDILFLALTAIGRSNVDLATFHREYAAVFDKLTER 1641
Fly 1642 ECNMYYRNQDLPPSASTIFCRAYF 1665 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Crag | NP_001162710.2 | uDENN | 189..279 | CDD:214824 | 45/89 (51%) |
DENN | 308..492 | CDD:307995 | 103/188 (55%) | ||
dDENN | 551..624 | CDD:129037 | 50/72 (69%) | ||
PPR repeat | 808..837 | CDD:276811 | 17/28 (61%) | ||
Dennd4a | XP_008764615.1 | uDENN | 194..276 | CDD:214824 | 45/89 (51%) |
DENN | 309..493 | CDD:396629 | 103/188 (55%) | ||
dDENN | 560..633 | CDD:129037 | 50/72 (69%) | ||
PPR_2 | 809..849 | CDD:404055 | 21/39 (54%) | ||
PPR repeat | 811..840 | CDD:276811 | 17/28 (61%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 398 | 1.000 | Domainoid score | I721 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2127 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H55933 | |
Inparanoid | 1 | 1.050 | 995 | 1.000 | Inparanoid score | I283 |
OMA | 1 | 1.010 | - | - | QHG46628 | |
OrthoDB | 1 | 1.010 | - | - | D47872at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001463 | |
OrthoInspector | 1 | 1.000 | - | - | otm45067 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102394 | |
Panther | 1 | 1.100 | - | - | O | PTHR12296 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X917 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.840 |