Sequence 1: | NP_001162710.2 | Gene: | Crag / 31800 | FlyBaseID: | FBgn0025864 | Length: | 1671 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001367509.1 | Gene: | lst-6 / 174146 | WormBaseID: | WBGene00016889 | Length: | 1487 | Species: | Caenorhabditis elegans |
Alignment Length: | 1011 | Identity: | 210/1011 - (20%) |
---|---|---|---|
Similarity: | 334/1011 - (33%) | Gaps: | 350/1011 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 78 SVRTTDCYI----YFRRGKDRPPLVDIGVLYD-----GHERIMSDAEIVAETPGGRVANVNNSSA 133
Fly 134 KTFLTYRRARADMPCNELVVTELCVIVQSKGERAPHAFCLIYKTLNKGYVGSDVYLCYKKSMYRP 198
Fly 199 KHISYKPEILLRYPTFDHTDFPLNLCPSVPLFCLPMGASLEAWPHVNGTEKRKPISPVFSTFVLT 263
Fly 264 VSDGTYKVYGSALTFYEDYDE---------------SKLSAEQKELLGWDE-------------- 299
Fly 300 ----------------EFGAQHSLHMIKAICLLSHHPFGDTFDKWLKYLHRMVLYDVNIPIPVER 348
Fly 349 YITQLLDEVPFPAPSIHLQLSSESNDRILLTQPEDSPLPRSGAGFHILLQNLGTDNCLHVLLLAL 413
Fly 414 TEQKILIHSLRPATLTAVAEAIVSLLFPFKWQCPYIPLCPLGLAEVLHAPLPYLIG---VDSRFF 475
Fly 476 DLYEPPTDVTCIDLDTNNISLCE------SQRHL-------------SPKLLP------------ 509
Fly 510 ----------KR----AARLLRQTLTELENAKPISYDSTNSLDRDIRKRKRELVLE--------- 551
Fly 552 --------------------------------------------QRIQEAFLLFMASILRGYRDF 572
Fly 573 LVPISKAPSVGATD---------PSALFQLKAFLRSRDKSHQKFFELMMKTQMFIRFIEER--SF 626
Fly 627 VSDGDHGLSFFDE-----------CAEKVGNYDETP---AQLHLVDWDTGQNSERTKYIFPPDSV 677
Fly 678 TPAGSQPGGGGGGLAYNYENFTLQPELLQSTKKTALSKFLQLQLNASLSPGSPIARRTKHEIKLS 742
Fly 743 QKMASRCQQHPEAWSKYLLATCYSLYFLILPSMVLDPRHAG-----KEPEILRAAY---DVLVRA 799
Fly 800 SRLKITCDEFCYRIMMQLCGIHNLPVLAVRLHYL-MKRSGVQANALTYGFYNRCVLESQWP---Q 860
Fly 861 DSTTISQIRWNRIKNVVLGAAQFRKAGKQRAASKVN 896 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Crag | NP_001162710.2 | uDENN | 189..279 | CDD:214824 | 23/89 (26%) |
DENN | 308..492 | CDD:307995 | 53/186 (28%) | ||
dDENN | 551..624 | CDD:129037 | 21/134 (16%) | ||
PPR repeat | 808..837 | CDD:276811 | 6/29 (21%) | ||
lst-6 | NP_001367509.1 | uDENN | 11..123 | CDD:214824 | 43/200 (22%) |
DENN | 199..381 | CDD:214823 | 52/184 (28%) | ||
dDENN | 537..614 | CDD:129037 | 20/81 (25%) | ||
RUN | 1064..1127 | CDD:214736 | |||
PLAT_RAB6IP1 | 1134..1244 | CDD:238855 | |||
RUN | 1419..1479 | CDD:214736 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2127 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3728 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |