Protein Alignment tut and PABPC4

DIOPT Version :9

• Sequence 1: NP_729346.1
• Gene: tut / 317996
• FlyBaseID: FBgn0052364
• Length: 230
• Species: Drosophila melanogaster
• Sequence 2: NP_001129125.1
• Gene: PABPC4 / 8761
• HGNCID: 8557
• Length: 660
• Species: Homo sapiens
• Alignment Length: 223
• Identity: 40/223 - (17%)
• Similarity: 80/223 - (35%)
• Gaps: 64/223 - (28%)

  Fly    11 QVNGTITITTRKVLDENLKSLLDE-----GKGELFLSCIPRN--HSCSPRWIVEVASELGEVYIM 68
            ::||.: :..|||.....||..:.     .|.:.|.:...:|  .......:.|:.|:.|:...:
Human   157 KMNGML-LNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220

  Fly    69 RYKIDFSGNSRGYAYLQYINVDLKESAMQYLPMRFRQLCMCLRVEPSTNNREL------------ 121
            :...|.:|.|:|:.::.|...:....|::.:                 |.:|:
Human   221 KVMRDPNGKSKGFGFVSYEKHEDANKAVEEM-----------------NGKEISGKIIFVGRAQK 268

  Fly   122 -VLKNVESSLRPWQVYQEMLKIHPFTIVRVYEYQLDQFFYIFEYRNNDSAASAHQRVRNSIRKFG 185
             |.:..|...:..|:.||  :|..:..|.:|...||...       :|      :::|.....||
Human   269 KVERQAELKRKFEQLKQE--RISRYQGVNLYIKNLDDTI-------DD------EKLRKEFSPFG 318

  Fly   186 EHAHISWLTAENIL-----SRASGSFCF 208
            .      :|:..::     |:..|..||
Human   319 S------ITSAKVMLEDGRSKGFGFVCF 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tut	NP_729346.1	RRM1_hnRNPR_like	36..115	CDD:240695	12/80 (15%)
		DUF3388	<127..169	CDD:288701	9/41 (22%)
PABPC4	NP_001129125.1	PABP-1234	11..640	CDD:130689	40/223 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	1	0.910