DRSC/TRiP Functional Genomics Resources

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Protein Alignment tut and AT5G03580

DIOPT Version :9

Sequence 1:NP_729346.1 Gene:tut / 317996 FlyBaseID:FBgn0052364 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_195978.1 Gene:AT5G03580 / 831785 AraportID:AT5G03580 Length:101 Species:Arabidopsis thaliana


Alignment Length:60 Identity:17/60 - (28%)
Similarity:31/60 - (51%) Gaps:1/60 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SELGEVYIMRYKIDFSGNSRGYAYLQYINVDLKESAMQYLPMR-FRQLCMCLRVEPSTNN 118
            |:.|:|.......||.|.|||:|::::.:.|....||.::..| ..|..:|::..|...:
plant    38 SDFGKVIRSVLAKDFRGESRGFAFIEFESADSAGRAMLHMDGRLIGQKILCVQRTPKVED 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutNP_729346.1 RRM1_hnRNPR_like 36..115 CDD:240695 16/55 (29%)
DUF3388 <127..169 CDD:288701
AT5G03580NP_195978.1 RRM_SF 19..90 CDD:240668 16/51 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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