Protein Alignment tut and PAB6

DIOPT Version :9

• Sequence 1: NP_729346.1
• Gene: tut / 317996
• FlyBaseID: FBgn0052364
• Length: 230
• Species: Drosophila melanogaster
• Sequence 2: NP_188259.1
• Gene: PAB6 / 820885
• AraportID: AT3G16380
• Length: 537
• Species: Arabidopsis thaliana
• Alignment Length: 165
• Identity: 37/165 - (22%)
• Similarity: 62/165 - (37%)
• Gaps: 37/165 - (22%)

  Fly    62 LGEVYIMRYKIDFSGNSRGYAYLQYINVDLKESAMQYLPMRFRQLCMCLRVEPSTNNREL-VLKN 125
            :..|.:||   |..|.|||:.::.:.|.:..:.||:       .||..     ...:::| |.|.
plant   228 VSSVVVMR---DGMGRSRGFGFVNFCNPENAKKAME-------SLCGL-----QLGSKKLFVGKA 277

  Fly   126 VESSLRPWQVYQEMLKIHPFTIVRVYEYQLDQFF------YIFEYRNNDSAASAHQRVRNSIRKF 184
            ::...|     :|||| ..|:         |.|.      :...|..|.|.:....|:|.....:
plant   278 LKKDER-----REMLK-QKFS---------DNFIAKPNMRWSNLYVKNLSESMNETRLREIFGCY 327

  Fly   185 GEHAHISWLTAENILSRASGSFCFQREVSQNRTRR 219
            |:......:..||..|:..|..||.......:.:|
plant   328 GQIVSAKVMCHENGRSKGFGFVCFSNCEESKQAKR 362

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tut	NP_729346.1	RRM1_hnRNPR_like	36..115	CDD:240695	13/52 (25%)
		DUF3388	<127..169	CDD:288701	10/47 (21%)
PAB6	NP_188259.1	PABP-1234	22..477	CDD:130689	37/165 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910