DRSC/TRiP Functional Genomics Resources

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Protein Alignment tut and elavl2

DIOPT Version :9

Sequence 1:NP_729346.1 Gene:tut / 317996 FlyBaseID:FBgn0052364 Length:230 Species:Drosophila melanogaster
Sequence 2:XP_012819022.1 Gene:elavl2 / 594913 XenbaseID:XB-GENE-491749 Length:390 Species:Xenopus tropicalis


Alignment Length:165 Identity:36/165 - (21%)
Similarity:64/165 - (38%) Gaps:43/165 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CTSQVN--GTITITTRKVLDENLKSLLDEGKGELFLSCIPRNHSCSPRWIVEVASELGEV---YI 67
            |.:..|  .||...:..|...|    .::.|..|.::.:|:|  .:...:..:...:||:   .:
 Frog    40 CNNTANCPNTINNCSSPVESSN----TEDSKTNLIVNYLPQN--MTQEELKSLFGSIGEIESCKL 98

  Fly    68 MRYKIDFSGNSRGYAYLQYINVDLKESAMQYLPMRFRQLCMCLRVEPSTNNRELVLKNVE----- 127
            :|.||. .|.|.||.::.||:....|.|:..|                 |...|..|.::     
 Frog    99 VRDKIT-EGQSLGYGFVNYIDPKDAEKAINTL-----------------NGLRLQTKTIKVSYAR 145

  Fly   128 ---SSLRPWQVYQEMLKIHPFTIVRVYEYQLDQFF 159
               :|:|...:|...|   |.|:.   :.:|:|.|
 Frog   146 PSSASIRDANLYVSGL---PKTMT---QKELEQLF 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutNP_729346.1 RRM1_hnRNPR_like 36..115 CDD:240695 18/81 (22%)
DUF3388 <127..169 CDD:288701 9/41 (22%)
elavl2XP_012819022.1 ELAV_HUD_SF 64..389 CDD:273741 30/137 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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