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Protein Alignment CG12081 and MDS3
DIOPT Version :9
Sequence 1: | NP_001259343.1 |
Gene: | CG12081 / 31799 |
FlyBaseID: | FBgn0030053 |
Length: | 403 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_011318.2 |
Gene: | MDS3 / 852678 |
SGDID: | S000003165 |
Length: | 1487 |
Species: | Saccharomyces cerevisiae |
Alignment Length: | 280 |
Identity: | 58/280 - (20%) |
Similarity: | 91/280 - (32%) |
Gaps: | 99/280 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 68 PLKYPLVPF------------------QRYGHTVVAYKDRIYIWGG------------------- 95
|||.|.:|. .|.|..|...:..|::.||
Yeast 13 PLKLPPLPLTSDSNEFDECARKRLTLDYRTGSAVTLTRSNIFVHGGLTIPLNLPVVNSMQLQKEL 77
Fly 96 --------------RN-DENLCNTLYCFDPKTAQWSRPQVTGCLPGARDGHSACVIGNSMYIFGG 145
|| :|.:....:..|..:..|.|.:.: |..
Yeast 78 ILFFAKEKNNGSSFRNLNEWISKETFFLDLMSRTWYRVKTS---------------------FDQ 121
Fly 146 FVDEINEFSS-------DVHSLNLDTMEWRYVQTFGVPPSYRDFHASVAYEQERMYIFGGRGDKH 203
..:|:.:..| |.:.:..|..:.:.::: |...|.|| |:.|....:|||||. ..
Yeast 122 RTEELLKAESSSAKADNDTNEIRTDIKKGKSLES---PLKERLFH-SLCYLDGCLYIFGGL--TV 180
Fly 204 SPYHSQEETYCHEIVYLDMKTKVWHRPFTAGKVPVGRR-SHSMFVYN--------KLIYVFGGYN 259
||....|....:|:..||:.||.| ...:....:.|| :|:|.|.| |||.| ||.|
Yeast 181 SPQSGYELIATNELWKLDLNTKKW--SLLSDDPQIARRFNHTMHVKNENNDNRDTKLIIV-GGLN 242
Fly 260 GLLDQHFNDLYTFDPRTKLW 279
. :||....:..::.....|
Yeast 243 N-MDQPVKKIDIYNISQNCW 261
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.