DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12081 and AT5G18590

DIOPT Version :10

Sequence 1:NP_572494.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_197360.2 Gene:AT5G18590 / 831977 AraportID:AT5G18590 Length:708 Species:Arabidopsis thaliana


Alignment Length:316 Identity:71/316 - (22%)
Similarity:126/316 - (39%) Gaps:78/316 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLWTVHLDGGPQRVNHAAVGVGDFIYSFGGYCTG--YDYRYNEPIDVHALNAHTMRWTLVPQQ-- 61
            |:.:|:.:....|.||||..:|:.:...||....  .|       ||..||..:..|:....:  
plant    67 MVLSVNGEKPAPRFNHAAATIGNKMIVVGGESGSGLLD-------DVQVLNFDSCTWSTASSKVY 124

  Fly    62 LDDAGVPLKYPLVPFQRYGHTVVAYKDRIYIWGGRNDENLCN-TLYCFDPKTAQWSRPQVTGCLP 125
            |..:.:||   ::|..: ||.:|::..::.:.||:.|.:... :::.||..:..||.....|.||
plant   125 LSPSSLPL---MIPAWK-GHCLVSWGKKVLLVGGKTDPSSDRVSVWAFDTDSECWSLMDAKGDLP 185

  Fly   126 GARDGHSACVIGNSMYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQTFGVPPSYRDFHASVAYEQ 190
            .:|.||:.....:.:.:||| .|......:|:|..:|.:..|..:...|..|..|..|.:..::.
plant   186 VSRSGHTVVRASSVLILFGG-EDSKKRKLNDLHMFDLKSSTWLPLNCTGTRPCARSHHVATLFDD 249

  Fly   191 ERMYIFGGRGDKHSPYHSQEETYCHEIVYLDMKTKVWHRPFTAGKVPVGRRSHSMFVYNKLIYVF 255
            :.:::|||.|.                                               ||.:   
plant   250 KILFVFGGSGK-----------------------------------------------NKTL--- 264

  Fly   256 GGYNGLLDQHFNDLYTFDPRTKLWNLIRANGKAPTARRRQCAIVMGTRMFLFGGTS 311
                       ||||:.|..|.:|:.|:..|..|:.|...|.::.||:.::.||.|
plant   265 -----------NDLYSLDFETMVWSRIKIRGFHPSPRAGSCGVLCGTKWYITGGGS 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_572494.1 NanM 13..306 CDD:442289 66/297 (22%)
KELCH repeat 13..69 CDD:276965 15/59 (25%)
KELCH repeat 78..125 CDD:276965 11/47 (23%)
KELCH repeat 128..170 CDD:276965 11/41 (27%)
KELCH repeat 180..236 CDD:276965 6/55 (11%)
AT5G18590NP_197360.2 NanM 76..324 CDD:442289 69/307 (22%)
KELCH repeat 79..133 CDD:276965 17/63 (27%)
KELCH repeat 137..185 CDD:276965 11/48 (23%)
KELCH repeat 239..287 CDD:276965 17/108 (16%)
PLN02939 428..>698 CDD:215507
Myosin_tail_1 <602..>696 CDD:460256
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.