DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and AT5G04420

DIOPT Version :9

Sequence 1:NP_001259343.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001031832.1 Gene:AT5G04420 / 830321 AraportID:AT5G04420 Length:514 Species:Arabidopsis thaliana


Alignment Length:371 Identity:97/371 - (26%)
Similarity:158/371 - (42%) Gaps:61/371 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RVNHAAVGVGDFIYSFGGYCTGYDYRYNEPIDVHALNAHTMRWTLVP-----------QQLDDAG 66
            |..||||.|.:.:|..||...|   ||..  ||...:..::.|:.:.           |:.|.:.
plant    35 RYKHAAVVVDEKLYIVGGSRNG---RYLS--DVQVFDLRSLTWSSLKLKTESSSADNIQEDDGSS 94

  Fly    67 VPLKYPLVPFQRYGHTVVAYKDRIYIWGGRNDENLCNTLYCF-DPKTAQWSRPQVTGCLPGARDG 130
            :...:|.:.    .|.::.:.:::.:.||.:.::..|.|..| |.:|.......|.|.:|.:|.|
plant    95 LREAFPAIS----DHRMIKWGNKLLLIGGHSKKSSDNMLVRFIDLETHSCGVIDVFGNVPASRGG 155

  Fly   131 HSACVIGNSMYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQTFGVPPSYRDFHASVAYEQERMYI 195
            ||..::|:.:.:||| .|:.....:|:|.|:|:||.|..|:|....|..|..|.:..:....:.|
plant   156 HSITLVGSRVLVFGG-EDKNRRLLNDLHVLHLETMTWDVVETKQTRPVPRFDHTAATHSDRYLLI 219

  Fly   196 FGGRGDKHSPYHSQEETYCHEIVYLDMKTKVWHRPFTAGKVPVGRRSHSMFVYNKLIYVFGG--- 257
            ||  |..||.::|       ::..||::|..|.:|...|.|...|..|:....::..|:.||   
plant   220 FG--GCSHSIFYS-------DLHILDLQTMEWSQPHVQGDVVTPRAGHAGITIDENWYIVGGGDN 275

  Fly   258 YNGLLDQHFNDLYTFDPRTKL-WNL-IRANGKAPTARR--RQC-AIVMGTRMFL-FGGTSP---- 312
            ..|.|:....::      :|| |:. .....:.|.|..  ..| |.|.|..:.: |||.:.    
plant   276 STGCLETLVLNM------SKLVWSTSTHVEARHPLASEGLSVCSASVFGENILVAFGGYNGKYNN 334

  Fly   313 -------RSGSSSSPAAV-SPTQETGGAAAAGGVVPPGVALIDYSD 350
                   :.|.||.|... ||   ...||||.......:|..|.||
plant   335 DIFVMRLKPGESSHPKIFKSP---AAAAAAASVTAAYAIAKSDKSD 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_001259343.1 KELCH repeat 13..69 CDD:276965 17/66 (26%)
Kelch_6 13..60 CDD:290672 15/57 (26%)
KELCH repeat 78..125 CDD:276965 10/47 (21%)
Kelch_1 78..117 CDD:279660 8/39 (21%)
KELCH repeat 128..170 CDD:276965 16/41 (39%)
Kelch_3 137..188 CDD:290151 17/50 (34%)
KELCH repeat 180..236 CDD:276965 15/55 (27%)
Kelch_3 192..248 CDD:290151 16/55 (29%)
Kelch_5 237..276 CDD:290565 7/41 (17%)
AT5G04420NP_001031832.1 Kelch_1 34..75 CDD:366584 15/44 (34%)
KELCH repeat 35..128 CDD:276965 21/101 (21%)
PLN02193 <147..>336 CDD:177844 56/204 (27%)
KELCH repeat 153..201 CDD:276965 18/48 (38%)
KELCH repeat 204..243 CDD:276965 12/47 (26%)
KELCH repeat 255..294 CDD:276965 10/44 (23%)
Smc 395..>503 CDD:224117
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D933937at2759
OrthoFinder 1 1.000 - - FOG0001118
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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