DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and NSP3

DIOPT Version :10

Sequence 1:NP_572494.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_566545.1 Gene:NSP3 / 820886 AraportID:AT3G16390 Length:467 Species:Arabidopsis thaliana


Alignment Length:330 Identity:84/330 - (25%)
Similarity:133/330 - (40%) Gaps:67/330 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GGYCTGYDYRYNEPIDVHALNAHTM---------RWTLVPQQLDDAGVPLKYPLVPFQRYGHTVV 84
            ||...|:..|..:.:  |:|.|:..         .|..|.|..:..|:          |..|.:.
plant   120 GGKIVGFHGRSTDVL--HSLGAYVSLPSTPKLLGNWIKVEQNGEGPGL----------RCSHGIA 172

  Fly    85 AYKDRIYIWGGR--NDENLCNTLYCFDPKTAQWSRPQVTGCLPGARDGHSACV------IGNSMY 141
            ...::||.:||.  .::.:...||.||.:|..||....||.:|     |.:|:      :|:::|
plant   173 QVGNKIYSFGGELIPNQPIDKHLYVFDLETRTWSIAPATGDVP-----HLSCLGVRMVSVGSTLY 232

  Fly   142 IFGG--FVDEINEFSSDVHSLNLDTMEWRYVQTFGVPPSYRDFHASVAYEQERMYIFGGRG--DK 202
            .|||  |..:.|.|    :|.:..|.||:.:......|:.|.|| |:|.::|.:|:|||.|  |:
plant   233 TFGGRDFSRQYNGF----YSFDTTTNEWKLLTPVEEGPTPRSFH-SMAADEENVYVFGGVGAMDR 292

  Fly   203 HSPYHSQEETYCHEIVYLDMKTKVWHRPFTAGKVPVGRRSHSMFVYNKLIYVFGGYNGLLDQHFN 267
            .....|      :.||     .|.|......|.....|....:.|....:::..|:||.   ..:
plant   293 IKTLDS------YNIV-----DKTWFHCSNPGDSFSIRGGAGLEVVQGKVWIVYGFNGC---EVD 343

  Fly   268 DLYTFDPRTKLWNLIRANGKAPTARRRQCAIVMGTRMFLFGG---TSPRSGSSSSPAAVSPTQET 329
            |::.:||....|..:...|..|..|....:..:|..:.:|||   ..||       |.|.|.|..
plant   344 DVHFYDPAEDKWTQVETFGVKPNERSVFASAAIGKHIVIFGGEIAMDPR-------AHVGPGQLI 401

  Fly   330 GGAAA 334
            .|..|
plant   402 DGTFA 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_572494.1 NanM 13..306 CDD:442289 73/297 (25%)
KELCH repeat 13..69 CDD:276965 11/48 (23%)
KELCH repeat 78..125 CDD:276965 15/48 (31%)
KELCH repeat 128..170 CDD:276965 14/49 (29%)
KELCH repeat 180..236 CDD:276965 18/57 (32%)
NSP3NP_566545.1 PLN02193 1..467 CDD:177844 84/330 (25%)
KELCH repeat 166..211 CDD:276965 13/44 (30%)
KELCH repeat 215..266 CDD:276965 15/59 (25%)
KELCH repeat 269..311 CDD:276965 17/53 (32%)
KELCH repeat 319..365 CDD:276965 10/48 (21%)
KELCH repeat 368..417 CDD:276965 13/46 (28%)

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