DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and LKP2

DIOPT Version :10

Sequence 1:NP_572494.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_849983.1 Gene:LKP2 / 816408 AraportID:AT2G18915 Length:611 Species:Arabidopsis thaliana


Alignment Length:329 Identity:86/329 - (26%)
Similarity:123/329 - (37%) Gaps:44/329 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WTVHLDGG---PQRVNHAAVGVGDFIYSFGGYCTGYDYRYNEPIDVHALNAHTMRWTLVPQQLDD 64
            |.....||   |.|.|.:|..||:.|..|||               ..:|...|..|.| ..|..
plant   281 WRKFSVGGTVEPSRCNFSACAVGNRIVIFGG---------------EGVNMQPMNDTFV-LDLGS 329

  Fly    65 AGVPLKYPLV---PFQRYGHTVVAYK-DRIYIWGGRNDENLCNTLYCFDPKTAQWSRPQVTGCLP 125
            :....|..||   |..|:|||:.... .|:.::||.....|.|.::..|......|..:|:|..|
plant   330 SSPEWKSVLVSSPPPGRWGHTLSCVNGSRLVVFGGYGSHGLLNDVFLLDLDADPPSWREVSGLAP 394

  Fly   126 G-ARDGHSACVI-GNSMYIFGGFVDEINEFSSDVH--SLNLDTMEWRYVQTFGVPPSYRDFHASV 186
            . .|..||:|.: |..:.:.||..|. ....||..  .|::|...||.:.....||| |..|...
plant   395 PIPRSWHSSCTLDGTKLIVSGGCADS-GALLSDTFLLDLSMDIPAWREIPVPWTPPS-RLGHTLT 457

  Fly   187 AYEQERMYIFGGRGDKHSPYHSQEETYCHEIVYLDMKTKVWHRPFTAGK-------VPVGRRSH- 243
            .|...::.:|||.....:......:.|..:   |......|......|.       .|..|..| 
plant   458 VYGDRKILMFGGLAKNGTLRFRSNDVYTMD---LSEDEPSWRPVIGYGSSLPGGMAAPPPRLDHV 519

  Fly   244 SMFVYNKLIYVFGGYNGLLDQHFNDLYTFDPRTK--LWNLIRANGKAPT-ARRRQCAIVMGTRMF 305
            ::.:....|.:|||....||. .:.||..||..:  .|.::...|..|. |......:|.|||:.
plant   520 AISLPGGRILIFGGSVAGLDS-ASQLYLLDPNEEKPAWRILNVQGGPPRFAWGHTTCVVGGTRLV 583

  Fly   306 LFGG 309
            :.||
plant   584 VLGG 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_572494.1 NanM 13..306 CDD:442289 80/311 (26%)
KELCH repeat 13..69 CDD:276965 14/55 (25%)
KELCH repeat 78..125 CDD:276965 13/47 (28%)
KELCH repeat 128..170 CDD:276965 14/44 (32%)
KELCH repeat 180..236 CDD:276965 10/62 (16%)
LKP2NP_849983.1 PRK13558 <43..>151 CDD:237426
F-box_AtADO-like 197..243 CDD:438925
NanM 294..589 CDD:442289 82/316 (26%)
KELCH repeat 294..342 CDD:276965 17/63 (27%)
KELCH repeat 346..395 CDD:276965 13/48 (27%)
KELCH repeat 398..443 CDD:276965 14/45 (31%)
KELCH repeat 451..498 CDD:276965 9/49 (18%)
KELCH repeat 515..560 CDD:276965 13/45 (29%)
Blue background indicates that the domain is not in the aligned region.

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