DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and Klhdc3

DIOPT Version :9

Sequence 1:NP_001259343.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001157201.2 Gene:Klhdc3 / 71765 MGIID:2651568 Length:382 Species:Mus musculus


Alignment Length:408 Identity:193/408 - (47%)
Similarity:250/408 - (61%) Gaps:45/408 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WTVHLDGGPQRVNHAAVGVGDFIYSFGGYCTGYDYRYNEPIDVHALNAHTMRWTLVPQQLDDAGV 67
            |||||:|||:|||||||.||..:|||||||:|.||.....||||..||.::|||.:|        
Mouse     4 WTVHLEGGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTKLP-------- 60

  Fly    68 PLK------YPLVPFQRYGHTVVAYKDRIYIWGGRND-ENLCNTLYCFDPKTAQWSRPQVTGCLP 125
            |::      .|:||:.||||:.|...|.:::|||||| |..||.||.||..|.:||.|:|:|.:|
Mouse    61 PVRPAVRGQAPVVPYMRYGHSTVLIDDTVFLWGGRNDTEGACNVLYAFDVNTHKWSTPRVSGAVP 125

  Fly   126 GARDGHSACVIGNSMYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQTFGVPPSYRDFHASVAYEQ 190
            ||||||||||:|..||||||:....:.||:|:|.|:..||.|..|.|.|.|..:|||| |.....
Mouse   126 GARDGHSACVLGKIMYIFGGYEQLADCFSNDIHKLDTSTMTWTLVCTKGNPARWRDFH-SATMLG 189

  Fly   191 ERMYIFGGRGDKHSPYHSQEETYCHEIVYLDMKTKVW----HRPFTAGKVPVGRRSHSMFVYNKL 251
            ..||:||||.|:..|:||..|.||:.|...|.:|:.|    |.|.    :|.||||||.|.||..
Mouse   190 NHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPHTPV----LPEGRRSHSAFGYNGE 250

  Fly   252 IYVFGGYNGLLDQHFNDLYTFDPRTKLWNLIRANGKAPTARRRQCAIVMGTRMFLFGGTSPRSGS 316
            :|:|||||..|::||:||:.|:|.:..|..|...||.|..|||||..::|.::.|||||||    
Mouse   251 LYIFGGYNARLNRHFHDLWKFNPGSFTWKKIEPKGKGPCPRRRQCCCIVGDKIVLFGGTSP---- 311

  Fly   317 SSSPAAVSPTQETGGAAAAGGVVPPGVALIDYSDLHVLDFEPTLKTLATMVVLKHQLDISGLPRS 381
                   ||.:..|..          ..|||:||||:|||.|:||||..:.|:::.||.|.||..
Mouse   312 -------SPEEGLGDE----------FDLIDHSDLHILDFSPSLKTLCKLAVIQYSLDQSCLPHD 359

  Fly   382 FRSDLQMLTQPNSISRPI 399
            .|.:|..:|..::|||||
Mouse   360 IRWELNAMTTNSNISRPI 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_001259343.1 KELCH repeat 13..69 CDD:276965 29/55 (53%)
Kelch_6 13..60 CDD:290672 28/46 (61%)
KELCH repeat 78..125 CDD:276965 25/47 (53%)
Kelch_1 78..117 CDD:279660 21/39 (54%)
KELCH repeat 128..170 CDD:276965 23/41 (56%)
Kelch_3 137..188 CDD:290151 24/50 (48%)
KELCH repeat 180..236 CDD:276965 24/59 (41%)
Kelch_3 192..248 CDD:290151 27/59 (46%)
Kelch_5 237..276 CDD:290565 23/38 (61%)
Klhdc3NP_001157201.2 KELCH repeat 180..236 CDD:276965 24/60 (40%)
Kelch 4 191..249 28/61 (46%)
KELCH repeat 239..283 CDD:276965 23/43 (53%)
Kelch 5 251..301 23/49 (47%)
KELCH repeat 14..62 CDD:276965 29/55 (53%)
Kelch_6 14..61 CDD:372847 29/54 (54%)
Kelch 1 25..77 24/59 (41%)
PLN02153 74..>318 CDD:177814 123/259 (47%)
KELCH repeat 77..124 CDD:276965 25/46 (54%)
Kelch 2 88..138 30/49 (61%)
KELCH repeat 128..173 CDD:276965 24/44 (55%)
Kelch 3 139..189 23/50 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 85 1.000 Domainoid score I8222
eggNOG 1 0.900 - - E1_KOG4693
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14290
Inparanoid 1 1.050 381 1.000 Inparanoid score I2042
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54529
OrthoDB 1 1.010 - - D933937at2759
OrthoFinder 1 1.000 - - FOG0001118
OrthoInspector 1 1.000 - - oto94956
orthoMCL 1 0.900 - - OOG6_102848
Panther 1 1.100 - - LDO PTHR46461
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1494
SonicParanoid 1 1.000 - - X5342
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.870

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