DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and Hcfc2

DIOPT Version :9

Sequence 1:NP_001259343.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_030101101.1 Gene:Hcfc2 / 67933 MGIID:1915183 Length:788 Species:Mus musculus


Alignment Length:263 Identity:79/263 - (30%)
Similarity:123/263 - (46%) Gaps:22/263 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VPFQRYGHTVVAYKDRIYIWGGRNDENLCNTLYCFDPKTAQWSRPQVTGCLPGARDGHSACVIGN 138
            ||..|:||..||.::.:.|:||.| |.:.:.|:.::..|.||..|.|.|.:|.....|.....|.
Mouse    19 VPRARHGHRAVAIRELMIIFGGGN-EGIADELHVYNTVTNQWFLPAVRGDIPPGCAAHGFVCDGT 82

  Fly   139 SMYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQ----TFGVPPSYRDFHASVAYEQERMYIFGGR 199
            .:.:|||.| |...:|::::.|......|:.|:    ..|.||..|..|:...| ..:.|:|||.
Mouse    83 RILVFGGMV-EYGRYSNELYELQASRWLWKKVKPQPPPSGFPPCPRLGHSFSLY-GNKCYLFGGL 145

  Fly   200 GDKHSPYHSQEETYCHEIVYLDMK----TKVWHRPFTAGKVPVGRRSHSMFVYNK------LIYV 254
            .::....::....|.::...|:::    ...|..|.|.|.||..|.||:..:|.|      .:||
Mouse   146 ANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPATKGVVPSPRESHTAIIYCKKDSASPKMYV 210

  Fly   255 FGGYNGLLDQHFNDLYTFDPRTKLWNLIRANGKAPTARRRQCAIVMGTRMFLFGGTSPRSGSS-- 317
            |||..|   ...:||:..|..|..|:.....|..|..|....|.|:|.:|::|||..|..|.:  
Mouse   211 FGGMCG---ARLDDLWQLDLETMSWSKPETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENPE 272

  Fly   318 SSP 320
            :||
Mouse   273 TSP 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_001259343.1 KELCH repeat 13..69 CDD:276965
Kelch_6 13..60 CDD:290672
KELCH repeat 78..125 CDD:276965 17/46 (37%)
Kelch_1 78..117 CDD:279660 14/38 (37%)
KELCH repeat 128..170 CDD:276965 10/41 (24%)
Kelch_3 137..188 CDD:290151 15/54 (28%)
KELCH repeat 180..236 CDD:276965 13/59 (22%)
Kelch_3 192..248 CDD:290151 15/59 (25%)
Kelch_5 237..276 CDD:290565 15/44 (34%)
Hcfc2XP_030101101.1 PLN02193 <2..262 CDD:177844 73/248 (29%)
KELCH repeat 23..69 CDD:276965 17/46 (37%)
KELCH repeat 127..186 CDD:276965 13/59 (22%)
PLN02193 <232..>375 CDD:177844 15/44 (34%)
KELCH repeat 245..312 CDD:276965 12/31 (39%)
FN3 <547..601 CDD:238020
FN3 607..707 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1494
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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