DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and klhdc4

DIOPT Version :10

Sequence 1:NP_572494.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001119902.2 Gene:klhdc4 / 569887 ZFINID:ZDB-GENE-030131-2057 Length:586 Species:Danio rerio


Alignment Length:247 Identity:69/247 - (27%)
Similarity:97/247 - (39%) Gaps:49/247 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PQRVNHAAVGV---GDFIYSFGGYCTGYD----YRYNEPIDVHALNAHTMRWTLVPQQLDDAGVP 68
            |:|....||.|   |..::.|||.....|    |.|.   |:..|:..|..|..|          
Zfish   117 PRRCAQQAVVVPQGGGQMWVFGGEFASPDGEQFYHYK---DLWVLHLGTRTWEQV---------- 168

  Fly    69 LKYPLVPFQRYGHTVVAYKDRIYIWGG----RNDENLCNTLYCFDPKTAQWSRPQVTGCLPGARD 129
             |.|..|..|.||.:|..|.::.::||    ..|....|.::.|:..|..|||.|.||..|..| 
Zfish   169 -KAPGAPSGRSGHRMVLSKRQLLVFGGFHESTRDYIYYNDVHAFNLDTFTWSRLQPTGTGPCPR- 231

  Fly   130 GHSACVI-----GNSMYIFGGF--------VDEINEFSSDVHSLNLDTME------WRYVQTFGV 175
              |||.:     ||.:.|:||:        ||: ....||:..|..:..|      |..|...||
Zfish   232 --SACQMTPTSDGNGVIIYGGYSKARAKKDVDK-GTIHSDMFLLRREGKEDQEKWTWTRVNPSGV 293

  Fly   176 PPSYRDFHASVAYEQERMYIFGGRGDKHSPYHSQEETYCHEIVYLDMKTKVW 227
            .|..|...:.......|..:|||..|:... .|.|..:.:::.:.||....|
Zfish   294 KPPPRSGFSLAVGPGGRALLFGGVCDEEDE-ESLEGDFFNDLYFYDMNKNRW 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_572494.1 NanM 13..306 CDD:442289 68/245 (28%)
KELCH repeat 13..69 CDD:276965 16/62 (26%)
KELCH repeat 78..125 CDD:276965 17/50 (34%)
KELCH repeat 128..170 CDD:276965 16/60 (27%)
KELCH repeat 180..236 CDD:276965 11/48 (23%)
klhdc4NP_001119902.2 None

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