DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and hcfc1b

DIOPT Version :10

Sequence 1:NP_572494.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001122009.1 Gene:hcfc1b / 565206 ZFINID:ZDB-GENE-030131-2411 Length:1993 Species:Danio rerio


Alignment Length:254 Identity:76/254 - (29%)
Similarity:121/254 - (47%) Gaps:22/254 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VPFQRYGHTVVAYKDRIYIWGGRNDENLCNTLYCFDPKTAQWSRPQVTGCLPGARDGHSACVIGN 138
            ||..|:||..||.|:.:.::||.| |.:.:.|:.::..|.||..|.|.|.:|.....:.....|.
Zfish    23 VPRPRHGHRAVAIKELMVVFGGGN-EGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGT 86

  Fly   139 SMYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQ----TFGVPPSYRDFHASVAYEQERMYIFGGR 199
            .:.:|||.| |..::|:|::.|.....||:.::    ..|.||..|..| |.:....:.|:|||.
Zfish    87 RLLVFGGMV-EYGKYSNDLYELQASRWEWKRLKPKAPKNGPPPCPRLGH-SFSLVGNKCYLFGGL 149

  Fly   200 GDKHSPYHSQEETYCHEIVYLDMK----TKVWHRPFTAGKVPVGRRSHSMFVY-------NKLIY 253
            .:......:....|.:::..|:::    ...|..|.|.|.:|..|.||:..||       ::|| 
Zfish   150 ANDSEDPKNNIPRYLNDLYTLELRPGSNVAGWDIPITYGVLPPPRESHTAVVYTEKTSKKSRLI- 213

  Fly   254 VFGGYNGLLDQHFNDLYTFDPRTKLWNLIRANGKAPTARRRQCAIVMGTRMFLFGGTSP 312
            ::||.:|.   ...||:|.|..|..||....:|.||..|....|..:..:||:|||..|
Zfish   214 IYGGMSGC---RLGDLWTLDIDTLTWNKPAISGAAPLPRSLHSATTITNKMFVFGGWVP 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_572494.1 NanM 13..306 CDD:442289 71/246 (29%)
KELCH repeat 13..69 CDD:276965
KELCH repeat 78..125 CDD:276965 17/46 (37%)
KELCH repeat 128..170 CDD:276965 11/41 (27%)
KELCH repeat 180..236 CDD:276965 13/59 (22%)
hcfc1bNP_001122009.1 NanM 19..338 CDD:442289 76/254 (30%)
KELCH repeat 27..74 CDD:276965 17/47 (36%)
KELCH repeat 78..128 CDD:276965 12/50 (24%)
KELCH repeat 194..247 CDD:276965 19/56 (34%)
KELCH repeat 249..313 CDD:276965 8/21 (38%)
Herpes_BLLF1 <340..774 CDD:282904
PHA03247 <397..609 CDD:223021
Herpes_BLLF1 <1138..1484 CDD:282904
FN3 1851..1953 CDD:473895
Blue background indicates that the domain is not in the aligned region.

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