DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12081 and si:dkey-3d4.3

DIOPT Version :9

Sequence 1:NP_001259343.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_683707.1 Gene:si:dkey-3d4.3 / 555952 ZFINID:ZDB-GENE-070912-527 Length:422 Species:Danio rerio


Alignment Length:410 Identity:90/410 - (21%)
Similarity:156/410 - (38%) Gaps:116/410 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LWTVHLDGGP---QRVNHAAVGVGDFIYSFGG--YCTGYDY-RYNEPIDVHALNAHTMRWTLVPQ 60
            |||......|   .|..||:......:|..||  .|:..|: :||...:         .|..:|.
Zfish     9 LWTPVPQQCPAPCDRYKHASCAHRGHVYLLGGREKCSLRDFWKYNVVCN---------DWVELPC 64

  Fly    61 QLDDAGVPLKYPLVPFQRYGHTVVAYKDRIYIWGGRNDENLCNT---LYCFDPKTAQW-----SR 117
            ..::|         |.:...||:||::..:|::||..|.:..|:   |:.||.....|     :.
Zfish    65 DSEEA---------PEEVEEHTMVAHQGFLYVFGGLRDSSYSNSKTPLWVFDTGKECWINWKAAS 120

  Fly   118 PQVTGCLPGARDGHSACVIGNSMYIFGGFVD---EINEFSSDVHSLNLDTMEWRYVQTFGVPPSY 179
            ..:.|..||.|.||||.::|:||||:||::|   ...||             |::          
Zfish   121 VALQGVTPGNRKGHSAVILGSSMYIYGGYIDIKGSTKEF-------------WKF---------- 162

  Fly   180 RDFHASVAYEQERMYIFGGRGDKHSPYHSQEETYCHEIVYLDMKTKVWHRPFTAGKVPVGRRSHS 244
                                                     |.::::|....:|...|..|.|||
Zfish   163 -----------------------------------------DFESRLWSLRSSAQVGPGPRHSHS 186

  Fly   245 MFVYNKLIYVFGGYNGLLDQHFNDLYTFDPRTKLWNLIRANGKAPTARRRQCAIVMGTRMFLFGG 309
            ...:.:.:|::||..||.:|  .||:::...::.|:.|:.: ..|:......|::....:.:|||
Zfish   187 AVTHGEWMYLYGGLQGLREQ--KDLWSWSSASQTWSCIKFH-SGPSRLVGHSAVLFKDSILIFGG 248

  Fly   310 TSPRSGSSSSPAAVSPTQETGGAAAAGGVVP--PGVALIDYSDLHV-----LDFEPTLKTLATMV 367
            ...:|...:|....:...:|...      :|  ||.|.: |...|.     ..|:||.:|.....
Zfish   249 GETQSSPQNSLWKFNLETQTWKK------LPLLPGSASV-YRIHHCSVGLGQSFQPTTQTSIYYR 306

  Fly   368 VLKHQLDISGLPRSFRSDLQ 387
            .:.:..:|....|.|::..|
Zfish   307 EIPNSHNIKNKLRPFKNKCQ 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_001259343.1 KELCH repeat 13..69 CDD:276965 13/58 (22%)
Kelch_6 13..60 CDD:290672 11/49 (22%)
KELCH repeat 78..125 CDD:276965 14/54 (26%)
Kelch_1 78..117 CDD:279660 13/46 (28%)
KELCH repeat 128..170 CDD:276965 16/44 (36%)
Kelch_3 137..188 CDD:290151 11/53 (21%)
KELCH repeat 180..236 CDD:276965 3/55 (5%)
Kelch_3 192..248 CDD:290151 8/55 (15%)
Kelch_5 237..276 CDD:290565 13/38 (34%)
si:dkey-3d4.3XP_683707.1 KELCH repeat 23..69 CDD:276965 12/54 (22%)
Kelch_1 23..63 CDD:279660 11/48 (23%)
KELCH repeat 73..130 CDD:276965 15/56 (27%)
Kelch_1 76..113 CDD:279660 12/36 (33%)
KELCH repeat 131..175 CDD:276965 18/107 (17%)
Kelch_3 140..188 CDD:290151 19/111 (17%)
Kelch_5 179..216 CDD:290565 13/38 (34%)
KELCH repeat 182..228 CDD:276965 14/48 (29%)
KELCH repeat 231..276 CDD:276965 8/50 (16%)
Kelch_6 232..276 CDD:290672 8/49 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D933937at2759
OrthoFinder 1 1.000 - - FOG0001118
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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