DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and FBXO42

DIOPT Version :9

Sequence 1:NP_001259343.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_061867.1 Gene:FBXO42 / 54455 HGNCID:29249 Length:717 Species:Homo sapiens


Alignment Length:454 Identity:103/454 - (22%)
Similarity:165/454 - (36%) Gaps:112/454 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GGP--QRVNHAA--VGVGDFIYSFGGYCT--GYDYRYNEPIDVHALNAHTMRWTLVPQQLDDAGV 67
            |.|  ||.:|:|  ......:|.||| ||  ..:..:|   |:..|:.::..|..          
Human   113 GTPITQRFSHSACYYDANQSMYVFGG-CTQSSCNAAFN---DLWRLDLNSKEWIR---------- 163

  Fly    68 PLKYPLVPFQRYGHTVVAYKDRIYIWGG---------RNDENLCNTLYCFDPKTAQWSRPQVTGC 123
            ||.....|..:.|.|:|.|||.:.::||         ...|...:.::.:.|....|:      |
Human   164 PLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWN------C 222

  Fly   124 L-----PGARDGHSACVIGNSMYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQTFGVPPSYRDFH 183
            :     |....|||:|||.:.|.:|||.:.. .:.|:||..|:|:...|......|..|..|...
Human   223 IVTTHGPPPMAGHSSCVIDDKMIVFGGSLGS-RQMSNDVWVLDLEQWAWSKPNISGPSPHPRGGQ 286

  Fly   184 ASVAYEQERMYIFGGRG------------DKHS-PY-----------HSQEETYCHEIVYLDMKT 224
            :.:..:...:.|.||.|            ..|| |:           |...|.:||....:....
Human   287 SQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEEHGAPELWCHPACRVGQCV 351

  Fly   225 KVWHRPFTAGKVPVGRRSHSMFVYNKLIYVFGGYNGLLDQHFNDLYTFDPRTKLW---NLIRANG 286
            .|:      .:.|.||...|..:.::...:......|:           |.|:.:   :.:|:..
Human   352 VVF------SQAPSGRAPLSPSLNSRPSPISATPPALV-----------PETREYRSQSPVRSMD 399

  Fly   287 KAPTARRRQCAIVMGTRMFLFGGTSPR----SGSSSSPAAVSPTQETGGAAAAGGVVPPGVALID 347
            :||....|            :|...||    :.|.|...::||.:..|.....||.:.||.|.:.
Human   400 EAPCVNGR------------WGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVG 452

  Fly   348 YSDLH--VLDFEPTLKTLATMVVLKHQLDIS----GLP-----RSFRSDLQMLTQPNSISRPIN 400
            .|.|.  |....|:..:......||..|.::    .||     |....||....:|.|.|.|::
Human   453 GSSLDSPVQAISPSTPSAPEGYDLKIGLSLAPRRGSLPDQKDLRLGSIDLNWDLKPASSSNPMD 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_001259343.1 KELCH repeat 13..69 CDD:276965 13/59 (22%)
Kelch_6 13..60 CDD:290672 13/50 (26%)
KELCH repeat 78..125 CDD:276965 12/60 (20%)
Kelch_1 78..117 CDD:279660 11/47 (23%)
KELCH repeat 128..170 CDD:276965 16/41 (39%)
Kelch_3 137..188 CDD:290151 13/50 (26%)
KELCH repeat 180..236 CDD:276965 13/79 (16%)
Kelch_3 192..248 CDD:290151 16/79 (20%)
Kelch_5 237..276 CDD:290565 6/38 (16%)
FBXO42NP_061867.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34
F-box-like 47..>82 CDD:315592
KELCH repeat 119..168 CDD:276965 15/62 (24%)
Kelch_3 130..182 CDD:315978 16/65 (25%)
Kelch 1 132..184 17/65 (26%)
KELCH repeat 174..229 CDD:276965 12/60 (20%)
Kelch_3 183..240 CDD:315978 13/62 (21%)
Kelch 2 186..242 13/61 (21%)
Guanylate_kin 228..>360 CDD:331880 33/138 (24%)
Kelch_5 229..268 CDD:316377 16/39 (41%)
KELCH repeat 232..271 CDD:276965 15/39 (38%)
Kelch 3 244..293 13/49 (27%)
Kelch 4 295..342 9/46 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..474 26/135 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 570..631
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1494
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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