DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and klhdc3

DIOPT Version :9

Sequence 1:NP_001259343.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_021336600.1 Gene:klhdc3 / 406553 ZFINID:ZDB-GENE-040426-2426 Length:382 Species:Danio rerio


Alignment Length:408 Identity:187/408 - (45%)
Similarity:240/408 - (58%) Gaps:45/408 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WTVHLDGGPQRVNHAAVGVGDFIYSFGGYCTGYDYRYNEPIDVHALNAHTMRWTLVPQQLDDAGV 67
            |:|||:|||:|||||||.||..:|||||||:|.||.....||||..|..::|||.:|        
Zfish     4 WSVHLEGGPRRVNHAAVSVGHKVYSFGGYCSGEDYETLRQIDVHVFNTVSLRWTKLP-------- 60

  Fly    68 PLKYPL----------VPFQRYGHTVVAYKDRIYIWGGRND-ENLCNTLYCFDPKTAQWSRPQVT 121
                |:          ||:.|||||.|...|.|.||||||| |..||.||.||....:|..|:::
Zfish    61 ----PVRTGGREHAREVPYMRYGHTAVLADDTILIWGGRNDTEGACNVLYAFDINQHRWFTPKIS 121

  Fly   122 GCLPGARDGHSACVIGNSMYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQTFGVPPSYRDFHASV 186
            |.:|||||||||||:|.:||||||:....:.||:::|.|:...|.|..|...|.|..:|||| |.
Zfish   122 GTVPGARDGHSACVLGKAMYIFGGYEQLADCFSNEIHKLDTSNMCWSLVNARGTPARWRDFH-SA 185

  Fly   187 AYEQERMYIFGGRGDKHSPYHSQEETYCHEIVYLDMKTKVWHRPFTAGKVPVGRRSHSMFVYNKL 251
            .....:|::||||.|:..|:||..|.||::|...|.:|..|....||..:|.||||||.|.||..
Zfish   186 TIIGTKMFVFGGRADRFGPFHSNNEIYCNKIKIFDTETNSWMNTHTAQLMPEGRRSHSAFAYNGE 250

  Fly   252 IYVFGGYNGLLDQHFNDLYTFDPRTKLWNLIRANGKAPTARRRQCAIVMGTRMFLFGGTSPRSGS 316
            :|:|||||..||:|||||:.|.|....|..:...||.|..|||||..::|.|:.|||||||    
Zfish   251 LYIFGGYNARLDRHFNDLWKFSPEAFSWKKVEPRGKGPCPRRRQCCCMVGDRIILFGGTSP---- 311

  Fly   317 SSSPAAVSPTQETGGAAAAGGVVPPGVALIDYSDLHVLDFEPTLKTLATMVVLKHQLDISGLPRS 381
                   .|.|..|..          ..|:|:|||::|||.|.||||..:.|:::.||.||||..
Zfish   312 -------CPEQGMGDE----------FNLMDHSDLYILDFSPNLKTLCKLAVIQYSLDQSGLPHD 359

  Fly   382 FRSDLQMLTQPNSISRPI 399
            .|.:|..:|..::|||||
Zfish   360 IRWELNAMTTNSTISRPI 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_001259343.1 KELCH repeat 13..69 CDD:276965 28/55 (51%)
Kelch_6 13..60 CDD:290672 27/46 (59%)
KELCH repeat 78..125 CDD:276965 25/47 (53%)
Kelch_1 78..117 CDD:279660 23/39 (59%)
KELCH repeat 128..170 CDD:276965 21/41 (51%)
Kelch_3 137..188 CDD:290151 21/50 (42%)
KELCH repeat 180..236 CDD:276965 23/55 (42%)
Kelch_3 192..248 CDD:290151 26/55 (47%)
Kelch_5 237..276 CDD:290565 25/38 (66%)
klhdc3XP_021336600.1 PLN02193 <9..198 CDD:330882 94/201 (47%)
KELCH repeat 14..62 CDD:276965 28/59 (47%)
KELCH repeat 77..125 CDD:276965 25/47 (53%)
KELCH repeat 128..173 CDD:276965 22/44 (50%)
PLN02193 <167..>326 CDD:330882 74/180 (41%)
KELCH repeat 180..236 CDD:276965 23/56 (41%)
KELCH repeat 239..283 CDD:276965 24/43 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14290
Inparanoid 1 1.050 226 1.000 Inparanoid score I3475
OMA 1 1.010 - - QHG54529
OrthoDB 1 1.010 - - D393851at33208
OrthoFinder 1 1.000 - - FOG0001118
OrthoInspector 1 1.000 - - oto41114
orthoMCL 1 0.900 - - OOG6_102848
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5342
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.880

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