DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and klhdc4

DIOPT Version :10

Sequence 1:NP_572494.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_002936149.3 Gene:klhdc4 / 394683 XenbaseID:XB-GENE-987963 Length:579 Species:Xenopus tropicalis


Alignment Length:411 Identity:89/411 - (21%)
Similarity:141/411 - (34%) Gaps:95/411 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DFIYSFGG-YCTGY-DYRYNEPIDVHALNAHTMRWTLVPQQLDDAGVPLKYPLVPFQRYGHTVVA 85
            |.:..||| |..|. .:.|||   ::..|.....|:           .:..|..|.:|..|...|
 Frog    76 DELILFGGEYFNGQKTFLYNE---LYIYNIKKNTWS-----------KIDIPNPPPRRCAHQAAA 126

  Fly    86 YKD---RIYIWGGR----NDENLCN--TLYCFDPKTAQWSRPQVTGCLPGARDGHSACVIGNSMY 141
            ...   :|:|:||.    :.|...:  .|:....:|..|.:.:.:|. |..|.||........:.
 Frog   127 VPQGGGQIWIFGGEFASPDGEQFYHYKDLWVLHLQTKTWEQIKASGG-PSGRSGHRMTYCKRQLI 190

  Fly   142 IFGGFVDEINE--FSSDVHSLNLDTMEWRYVQTFGVPPSYRDFHASVAYEQERMYIFGGRGDKHS 204
            :||||.:...:  :.:||::.|||:..|..:...|..|..|........:...:.|:||. .|..
 Frog   191 VFGGFHESTRDYIYYNDVYTFNLDSFTWAKLSPSGTAPLPRSGCQMTTNQDGSVVIYGGY-SKQK 254

  Fly   205 PYHSQEETYCHEIVYLDMKTK-----VWHRPFTAGKVPVGRRSHS-MFVYNKLIYVFGGY----- 258
            .....::...|..::| :|.:     ||.|...:|..|..|...| ....|..|.:|||.     
 Frog   255 VKKDVDKGTVHTDMFL-LKQEGADKWVWSRLNPSGVKPTPRTGFSGTLGPNNRILLFGGVYDEEE 318

  Fly   259 -NGLLDQHFNDLYTFD-------------PRTKLWNLIRANGKAPTARRRQC------------- 296
             ..:....|||:|.:|             |:|:.....|.|.:|......:.             
 Frog   319 EESIEGDFFNDIYMYDMGKNRWFTGQIKGPKTEKKKRRRGNKQAEAESNSESGEVGAQKPPEPVE 383

  Fly   297 ---------AIVMGTRMFLFGGTSPRS------------GSSSSPAAVSPTQETGGAA------A 334
                     ..||..:..:.|..:..|            |:.|......|...|..||      |
 Frog   384 VIKEIVAEDGTVMTIKQVISGSATSESEEEDSVEEEDDEGARSPAVEPCPRSNTMIAAKQGVLYA 448

  Fly   335 AGGVVPPGVALIDYSDLHVLD 355
            .||:...|......:||:.||
 Frog   449 YGGMFEVGDRQFTLNDLYSLD 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_572494.1 NanM 13..306 CDD:442289 73/342 (21%)
KELCH repeat 13..69 CDD:276965 11/47 (23%)
KELCH repeat 78..125 CDD:276965 12/55 (22%)
KELCH repeat 128..170 CDD:276965 13/43 (30%)
KELCH repeat 180..236 CDD:276965 12/60 (20%)
klhdc4XP_002936149.3 NanM 59..342 CDD:442289 66/282 (23%)
KELCH repeat 119..174 CDD:276965 12/55 (22%)
KELCH repeat 177..226 CDD:276965 13/48 (27%)
KELCH repeat 231..291 CDD:276965 12/61 (20%)

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