DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and CG6758

DIOPT Version :9

Sequence 1:NP_001259343.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_611647.1 Gene:CG6758 / 37532 FlyBaseID:FBgn0034704 Length:667 Species:Drosophila melanogaster


Alignment Length:366 Identity:77/366 - (21%)
Similarity:122/366 - (33%) Gaps:118/366 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 MRWTLVPQQLDDAGVPLKYPLVPF--QRYGHTVVAYKDRIYIW-GGRNDENLCNTLYCFDPKTAQ 114
            :||.:..||..:.|..   .|:.|  .|:.|:.|...:.:|:: ||.:.:...|.|:.||....:
  Fly    79 LRWEVFSQQTVNGGAG---ALLSFIAGRFAHSAVRQDNSMYVFGGGSSSDTTFNDLWRFDLTHMR 140

  Fly   115 WSRPQVTGCLPGARDGHSACVIGNSMYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQTFGVPPSY 179
            |:||..||..|..:...|.....|.:.:|||                     |||       ||.
  Fly   141 WARPVATGTYPSPKGSASMVAWRNQLILFGG---------------------WRY-------PSL 177

  Fly   180 RDFHASVAYEQERMYIFGGRGDKHSPYHSQEETYC--HEIVYLDMKTKVW-HRPFTAGKVPVGRR 241
                                   |.||    :.:|  .|:.|.|:....| .|...:...|:.  
  Fly   178 -----------------------HPPY----QPWCLFDELHYYDLGKNRWLLRSSLSSPPPMA-- 213

  Fly   242 SHSMFVYNKLIYVFGGYNGLLDQ---HFNDLYTFD-PRTKLWNLIRANGKAPTARRRQCAIVMGT 302
            .||..|:...:.|||||. :.|.   :.||.:..| |..:.|..:......|:.|..|..:.:|.
  Fly   214 GHSATVHGDRMVVFGGYQ-IKDDFNVNSNDTWVLDLPEQRWWQPLFVGNTRPSPRYGQIQVELGR 277

  Fly   303 RMFLFGGTSPRSGSSSSPAAVSPTQETGGAAAAGGVVPPGVALIDYSDLHVLDFEPTLKTLATMV 367
            ...|.                     .||...|..|         |:|..:||....:.:..::.
  Fly   278 NHLLI---------------------VGGCGGANRV---------YTDAWLLDMTRDVWSWKSIA 312

  Fly   368 V-----------------LKHQLDISGLPRSFRSDLQMLTQ 391
            |                 :.:.|.:.|...:...|.||:.|
  Fly   313 VRNKRFGAVHMWCNPGCKVNNYLVVVGPSPNMPQDFQMMKQ 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_001259343.1 KELCH repeat 13..69 CDD:276965 5/15 (33%)
Kelch_6 13..60 CDD:290672 2/6 (33%)
KELCH repeat 78..125 CDD:276965 15/47 (32%)
Kelch_1 78..117 CDD:279660 11/39 (28%)
KELCH repeat 128..170 CDD:276965 7/41 (17%)
Kelch_3 137..188 CDD:290151 9/50 (18%)
KELCH repeat 180..236 CDD:276965 9/58 (16%)
Kelch_3 192..248 CDD:290151 12/58 (21%)
Kelch_5 237..276 CDD:290565 14/42 (33%)
CG6758NP_611647.1 F-box-like 24..>59 CDD:289689
KELCH repeat 103..148 CDD:276965 13/44 (30%)
Kelch_3 112..162 CDD:290151 14/49 (29%)
KELCH repeat 154..209 CDD:276965 19/109 (17%)
Kelch_5 209..249 CDD:290565 13/42 (31%)
KELCH repeat 212..257 CDD:276965 14/47 (30%)
KELCH repeat 267..314 CDD:276965 12/76 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446733
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1494
SonicParanoid 00.000 Not matched by this tool.
32.870

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