DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and slim

DIOPT Version :10

Sequence 1:NP_572494.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_523782.1 Gene:slim / 37121 FlyBaseID:FBgn0261477 Length:609 Species:Drosophila melanogaster


Alignment Length:321 Identity:81/321 - (25%)
Similarity:121/321 - (37%) Gaps:98/321 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GPQRVNHAAVGVGDFIYSFGGYCTGYDYRYNEPIDVHALNAHTMRWTLV----PQQLDDAGVPLK 70
            ||..|.|.     .|:|:.|| .||:||    ..||:.|:..|..|..|    |:..||      
  Fly   326 GPGIVIHK-----HFLYTIGG-TTGFDY----TCDVYRLDLRTGIWENVYISRPEMRDD------ 374

  Fly    71 YPLVPFQRYGHTVVAYKDRIYIWGGRNDENL--CNTLYCFDPKTAQW----SRPQVTGCLPGARD 129
                |..||.|.||.....|::.||....::  ...:..::.:...|    :.|.....  .|.|
  Fly   375 ----PEGRYRHEVVYDGKHIFVLGGGTSHSVYDLQRIPAYNLEANCWDYFETYPDQRAA--DADD 433

  Fly   130 GHS---------ACVIGNS------MYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQTFGVP-PS 178
            |:.         :||...|      .:|.||...:.:.:.||:..|||.|..|..::|..:| |.
  Fly   434 GNRGYPKPRKCFSCVQHQSSTGDIEAFITGGLQGDFSTYFSDIWKLNLRTKHWYRIETAILPRPL 498

  Fly   179 YRDFHASVAYEQERMYIFGGRGDKHSPYHSQEETYCHEIVYLDMKT-------KVWHRPFTAGKV 236
            |  ||::...:...||:|||                  |.|:|.:.       |:|   .|..|:
  Fly   499 Y--FHSAAHSDNGCMYVFGG------------------IEYIDKEMRRRNDLYKMW---MTVPKL 540

  Fly   237 PVGRRSHSMFVYNKLIYVFGGYNGLLDQHFNDLYTFDPRTKLWNLI--RANGKAPTARRRQ 295
                   |...::.:.|    ||..||       .:|.:|.|...|  |...:.|..|||:
  Fly   541 -------SEMCWDAITY----YNDNLD-------LYDRKTLLEAGIPKRFTERLPPQRRRR 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_572494.1 NanM 13..306 CDD:442289 79/318 (25%)
KELCH repeat 13..69 CDD:276965 19/59 (32%)
KELCH repeat 78..125 CDD:276965 10/52 (19%)
KELCH repeat 128..170 CDD:276965 15/56 (27%)
KELCH repeat 180..236 CDD:276965 13/62 (21%)
slimNP_523782.1 NanM 197..516 CDD:442289 57/213 (27%)
KELCH repeat 203..263 CDD:276965
KELCH repeat 267..321 CDD:276965
KELCH repeat 324..364 CDD:276965 17/47 (36%)
KELCH repeat 442..495 CDD:276965 14/52 (27%)
Blue background indicates that the domain is not in the aligned region.

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