DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and Klhdc3

DIOPT Version :10

Sequence 1:NP_572494.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_038939750.1 Gene:Klhdc3 / 363192 RGDID:1307105 Length:398 Species:Rattus norvegicus


Alignment Length:417 Identity:192/417 - (46%)
Similarity:249/417 - (59%) Gaps:53/417 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WTVHLDGGPQRVNHAAVGVGDFIYSFGGYCTGYDYRYNEPIDVHALNAHTMRWTLVPQQLDDAGV 67
            |||||:|||:|||||||.||..:|||||||:|.||.....||||..||.::|||.:|        
  Rat     4 WTVHLEGGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTKLP-------- 60

  Fly    68 PLK------YPLVPFQRYGHTVVAYKDRIYIWGGRND-ENLCNTLYCFDPKTAQWSRPQVTGCLP 125
            |::      .|:||:.||||:.|...|.:::|||||| |..||.||.||..|.:||.|:|:|.:|
  Rat    61 PVRPAVRGQAPVVPYMRYGHSTVLIDDTVFLWGGRNDTEGACNVLYAFDVNTHKWSTPRVSGTVP 125

  Fly   126 GARDGHSACVIGNSMYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQTFGVPPSYRDFHASVAYEQ 190
            ||||||||||:|..||||||:....:.||:|:|.|:..||.|..|.|.|.|..:|||| |.....
  Rat   126 GARDGHSACVLGKIMYIFGGYEQLADCFSNDIHKLDTSTMTWTLVCTKGNPARWRDFH-SATMLG 189

  Fly   191 ERMYIFGGRGDKHSPYHSQEETYCHEIVYLDMKTKVW----HRPFTAGKVPVGRRSHSMFVYNKL 251
            ..||:||||.|:..|:||..|.||:.|...|.:|:.|    |.|.    :|.||||||.|.||..
  Rat   190 NHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPHTPV----LPEGRRSHSAFGYNGE 250

  Fly   252 IYVFGGYNGLLDQHFNDLYTFDPRTKLWNLIRANGKAPTARRRQCAIVMGTRMFLFGGTSPRSGS 316
            :|:|||||..|::||:||:.|:|.:..|..|...||.|..|||||..::|.::.|||||||    
  Rat   251 LYIFGGYNARLNRHFHDLWKFNPGSFTWKKIEPKGKGPCPRRRQCCCIVGDKIVLFGGTSP---- 311

  Fly   317 SSSPAAVSPTQETGGAAAAGGVVPPGVALIDYSDLHVLDFEPTLKTLATMVVLKHQLDISGLPRS 381
                   ||.:..|..          ..|||:||||:|||.|:||||..:.|:::.||.|.||..
  Rat   312 -------SPEEGLGDE----------FDLIDHSDLHILDFSPSLKTLCKLAVIQYNLDQSCLPHD 359

  Fly   382 FRSDLQMLTQP------NSISRPINQA 402
            .|.  :.|..|      :|:..||:.|
  Rat   360 IRE--KSLLPPLLSLLLSSLPLPISPA 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_572494.1 NanM 13..306 CDD:442289 146/303 (48%)
KELCH repeat 13..69 CDD:276965 29/55 (53%)
KELCH repeat 78..125 CDD:276965 25/47 (53%)
KELCH repeat 128..170 CDD:276965 23/41 (56%)
KELCH repeat 180..236 CDD:276965 24/59 (41%)
Klhdc3XP_038939750.1 NanM 14..308 CDD:442289 148/306 (48%)
KELCH repeat 14..62 CDD:276965 29/55 (53%)
KELCH repeat 77..124 CDD:276965 25/46 (54%)
KELCH repeat 128..173 CDD:276965 24/44 (55%)
KELCH repeat 180..236 CDD:276965 24/60 (40%)
KELCH repeat 239..283 CDD:276965 23/43 (53%)

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