DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and Lztr1

DIOPT Version :9

Sequence 1:NP_001259343.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_006248769.1 Gene:Lztr1 / 360745 RGDID:1309100 Length:862 Species:Rattus norvegicus


Alignment Length:356 Identity:91/356 - (25%)
Similarity:147/356 - (41%) Gaps:60/356 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GGPQRVNHAAVGVGDFIYSFGGYCTGYDYRYNEPIDVHALN------AHTMRWTLVPQQLDDAGV 67
            |||........||...:    .....:|:..::.::...||      .|  ||..:|...:..|.
  Rat     5 GGPTGPGALTGGVSSKV----APSVDFDHSCSDSVEYLTLNFGPFETVH--RWRRLPPCDEFVGA 63

  Fly    68 PLKYPLVPFQRYGHTVVAYKDRIYIWGGRNDENLCNTLYCFDPKTAQWSRPQVTGCLPGARDGHS 132
                     :|..||||||||.||::||.|.:.:.|.|..||.|...|.|...||..|..|..||
  Rat    64 ---------RRSKHTVVAYKDAIYVFGGDNGKTMLNDLLRFDVKDCSWCRAFTTGTPPAPRYHHS 119

  Fly   133 ACVIGNSMYIFGGFVDEINEFS-----SDVHSLNLDTMEWRYVQTFGVPPSYRDFHASVAYEQER 192
            |.|.|:||::|||:..:|...|     :|:......|.:|...:..|..|..|..|.:..| .::
  Rat   120 AVVYGSSMFVFGGYTGDIYSNSNLKNKNDLFEYKFATGQWTEWKIEGRLPVARSAHGATVY-SDK 183

  Fly   193 MYIFGGRGDKHSPYHSQEETYCHEIVYLDMKTKVWHRPFTAGKVPVGRRSHSMFVYNKLIYVFGG 257
            ::||.|. |.::..:..     ..|...|.:...|.....:|::|....:..:.|....::||.|
  Rat   184 LWIFAGY-DGNARLNDM-----WTIGLQDRELTCWEEVAQSGEIPPSCCNFPVAVCRDKMFVFSG 242

  Fly   258 YNGLLDQHFNDLYTFDPRTKLW------NLIRANGKAPTARRRQCAIVMGTRMFLFGGTSPRSGS 316
            .:|.  :..|:|:.|:.:.|.|      :|:|.:...|..|.....:.....:::|||    :..
  Rat   243 QSGA--KITNNLFQFEFKDKTWTRIPTEHLLRGSPPPPQRRYGHTMVAFDRHLYVFGG----AAD 301

  Fly   317 SSSP-------------AAVSPT--QETGGA 332
            ::.|             ..|.|:  .|.|||
  Rat   302 NTLPNELHCYDVDFQTWEVVQPSSDSEVGGA 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_001259343.1 KELCH repeat 13..69 CDD:276965 10/61 (16%)
Kelch_6 13..60 CDD:290672 8/52 (15%)
KELCH repeat 78..125 CDD:276965 23/46 (50%)
Kelch_1 78..117 CDD:279660 20/38 (53%)
KELCH repeat 128..170 CDD:276965 16/46 (35%)
Kelch_3 137..188 CDD:290151 15/55 (27%)
KELCH repeat 180..236 CDD:276965 11/55 (20%)
Kelch_3 192..248 CDD:290151 9/55 (16%)
Kelch_5 237..276 CDD:290565 9/38 (24%)
Lztr1XP_006248769.1 KELCH repeat 65..111 CDD:276965 23/45 (51%)
Kelch_3 74..123 CDD:290151 21/48 (44%)
KELCH repeat 115..169 CDD:276965 17/53 (32%)
Kelch_3 124..180 CDD:290151 15/55 (27%)
Kelch_1 171..216 CDD:279660 10/51 (20%)
Kelch_3 234..289 CDD:290151 13/56 (23%)
Kelch_1 280..323 CDD:279660 6/46 (13%)
KELCH repeat 281..323 CDD:276965 6/45 (13%)
SPOP_C_like 571..631 CDD:269810
BTB 662..761 CDD:279045
BTB 665..762 CDD:197585
SPOP_C_like 765..>800 CDD:269810
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4693
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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