DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and fbxo42

DIOPT Version :10

Sequence 1:NP_572494.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001428920.1 Gene:fbxo42 / 335459 ZFINID:ZDB-GENE-030131-7399 Length:629 Species:Danio rerio


Alignment Length:311 Identity:75/311 - (24%)
Similarity:126/311 - (40%) Gaps:59/311 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 YPLVPF-QRYGHTVVAY--KDRIYIWGGRNDENLCNT----LYCFDPKTAQWSRPQVTGCLPGAR 128
            ||..|. ||:.|:...|  ...:|::||.. ::.||.    |:..|..:.:|.||..:|..|..:
Zfish    94 YPGTPITQRFSHSACYYDSNQSMYVFGGCT-QSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPK 157

  Fly   129 DGHSACVIGNSMYIFGGF-------VDEINEFSSDVHSLNLDTMEWRYVQTFGVPPSYRDFHASV 186
            .|.:..:.|:.:.:|||:       :.:...|..::|:.:.....|..:.|...||......:||
Zfish   158 AGATLVMYGDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSSV 222

  Fly   187 AYEQERMYIFGGR-GDKHSPYHSQEETYCHEIVYLDMKTKVWHRPFTAGKVPVGRRSHSMFVYNK 250
            .  :..|.:|||. |.:.         ..:|:..||::...|.:|..:|..|..|...|..|.::
Zfish   223 I--RSTMVVFGGSLGARQ---------MSNEVWVLDLEQWTWSKPTISGPSPHPRGGQSQIVMDE 276

  Fly   251 ----LIYVFGGYNGLLDQHFNDLYTFDPRTKLWNLIRANGK---------APTARRRQCAIVMGT 302
                ::...||.|.||...:. |:..|| ...|..:|...:         .|..:..||.:|...
Zfish   277 ETLLILGGCGGPNALLKDAWL-LHMSDP-CWTWQQLRVENEDHGAPELWCHPACKVGQCVVVFSQ 339

  Fly   303 RMFLFGGTSPRSGS--------SSSPAAVSP------TQETGGAAAAGGVV 339
            ..   .|.:|.|.|        ||:||.:.|      :|....:.|||.|:
Zfish   340 AP---SGRAPLSPSLNSRPSPISSTPAPLGPDPPSLRSQSPVRSGAAGAVL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_572494.1 NanM 13..306 CDD:442289 61/262 (23%)
KELCH repeat 13..69 CDD:276965
KELCH repeat 78..125 CDD:276965 14/52 (27%)
KELCH repeat 128..170 CDD:276965 8/48 (17%)
KELCH repeat 180..236 CDD:276965 13/56 (23%)
fbxo42NP_001428920.1 None
Blue background indicates that the domain is not in the aligned region.

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