DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12081 and krcp

DIOPT Version :10

Sequence 1:NP_572494.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_005172311.1 Gene:krcp / 323406 ZFINID:ZDB-GENE-030131-2126 Length:538 Species:Danio rerio


Alignment Length:292 Identity:75/292 - (25%)
Similarity:123/292 - (42%) Gaps:58/292 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GP---QRVNHAAV--GVGDFIYSFGGYCTGYDYRYNEPIDVHALNAHTMRWTLVPQQLDDAGVPL 69
            ||   .|:.|.|.  .....|:.|||  :.:...:|   |||.|:..:.|||||..|  ....||
Zfish   266 GPTPEARIGHTATYDPESKRIFVFGG--SKHKKWFN---DVHILDTQSWRWTLVEAQ--GKVPPL 323

  Fly    70 KYPLVPFQRYGHTVVAYKDRIYIWGG------RNDENLCNTLYCFDPKTAQWSRPQVTGCLPGAR 128
            .|         |:...::..::::||      ...:...:::|.|:|:.|.|.:|.|.|..|..|
Zfish   324 AY---------HSCSMFRGELFVFGGVFPRPHPEPDGCSDSIYIFNPEMAIWYQPIVNGEKPAPR 379

  Fly   129 DGHSACVIGNSMYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQTFGVPPSYRDFHASVAYEQERM 193
            .||||||:...:::|||:...:  ..:|:..|:|..||:..|:|.|..||.|.:|......:...
Zfish   380 SGHSACVMQGRIFVFGGWDTPV--CFNDMFMLDLGLMEFSPVKTSGTAPSPRSWHGCAVLSESSF 442

  Fly   194 YIFGGRGDKHS---PYHSQEETYC----------------HEIVYLDMKTKVWHRPFTAGKVPVG 239
            .|.||....::   .:....:|.|                |.|:.:         |.|..|..:.
Zfish   443 LIHGGYNGNNALSDAFIFNTDTSCWSSLTLPQLNSVPRAGHSIITM---------PTTCKKGSID 498

  Fly   240 RRSHSMFVYNKLIYVFGGYNGLLDQHFNDLYT 271
            .:...:....:.:.||||.:. ....|:||:|
Zfish   499 EQEELLESAPQTLLVFGGGDN-EGSFFSDLFT 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_572494.1 NanM 13..306 CDD:442289 73/286 (26%)
KELCH repeat 13..69 CDD:276965 18/57 (32%)
KELCH repeat 78..125 CDD:276965 11/52 (21%)
KELCH repeat 128..170 CDD:276965 15/41 (37%)
KELCH repeat 180..236 CDD:276965 11/74 (15%)
krcpXP_005172311.1 Kelch_4 216..263 CDD:433191
NanM 266..530 CDD:442289 75/292 (26%)
KELCH repeat 272..323 CDD:276965 18/57 (32%)
KELCH repeat 324..370 CDD:276965 9/54 (17%)
KELCH repeat 379..426 CDD:276965 18/48 (38%)
KELCH repeat 429..471 CDD:276965 7/41 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.