DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and Hcfc2

DIOPT Version :10

Sequence 1:NP_572494.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001008358.1 Gene:Hcfc2 / 314704 RGDID:1307385 Length:723 Species:Rattus norvegicus


Alignment Length:426 Identity:110/426 - (25%)
Similarity:161/426 - (37%) Gaps:109/426 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VPFQRYGHTVVAYKDRIYIWGGRNDENLCNTLYCFDPKTAQWSRPQVTGCLPGARDGHSACVIGN 138
            ||..|:||..||.::.:.|:||.| |.:.:.|:.::..|.||..|.|.|.:|.....|.....|.
  Rat    19 VPRARHGHRAVAIRELMIIFGGGN-EGIADELHVYNTVTNQWFLPAVRGDIPPGCAAHGFVCDGT 82

  Fly   139 SMYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQ----TFGVPPSYRDFHASVAYEQERMYIFGGR 199
            .:.:|||.| |...:|::::.|......|:.|:    ..|:||..|..|:...| ..:.|:|.|.
  Rat    83 RILVFGGMV-EYGRYSNELYELQASRWLWKKVKPQPPPSGLPPCPRLGHSFSLY-GNKCYLFAGL 145

  Fly   200 GDKHSPYHSQEETYCHEIVYLDMK----TKVWHRPFTAGKVPVGRRSHSMFVYNK------LIYV 254
            .::....::....|.::...|:::    ...|..|.|.|.||..|.||:..:|.|      .:||
  Rat   146 ANESEDSNNNVPRYLNDFYELELQHGSGVVGWSVPATKGTVPSPRESHTAVIYCKRDSGSPKMYV 210

  Fly   255 FGGYNGLLDQHFNDLYTFDPRTKLWNLIRANGKAPTARRRQCAIVMGTRMFLFGGTSPRSG--SS 317
            |||..|   ...:||:..|..|..|:.....|..|..|....|.|:|.:|::|||..|..|  :.
  Rat   211 FGGMCG---ARLDDLWQLDLETMSWSKPETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTE 272

  Fly   318 SSP----------------------AAVSPTQE----------TGGAAAAGGV------------ 338
            :||                      ..||.:||          .|..|.|.|.            
  Rat   273 NSPHDCEWRCTSSFSYLNLDTAEWTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYK 337

  Fly   339 ---------------------VPPGVALI--DYSDLHV-LDFEPTLK--TLATMVVLKHQL---D 374
                                 .|..|.||  ..:..|| .|..||::  .|.....|.||.   |
  Rat   338 KALNSQVCCKDLWYLDTEKPPAPSQVQLIKATTNSFHVKWDEVPTVEGYLLQLNTDLTHQAASPD 402

  Fly   375 ISGLPRSFRSDLQMLTQP----------NSISRPIN 400
            .|..|.:    |...|.|          ||:|.|.|
  Rat   403 ASAAPNT----LGGRTDPHRQGSNSILHNSVSDPAN 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_572494.1 NanM 13..306 CDD:442289 71/245 (29%)
KELCH repeat 13..69 CDD:276965
KELCH repeat 78..125 CDD:276965 17/46 (37%)
KELCH repeat 128..170 CDD:276965 10/41 (24%)
KELCH repeat 180..236 CDD:276965 12/59 (20%)
Hcfc2NP_001008358.1 NanM 14..332 CDD:442289 86/318 (27%)
KELCH repeat 23..69 CDD:276965 17/46 (37%)
Kelch 1 34..79 14/45 (31%)
Kelch 2 83..130 13/47 (28%)
KELCH repeat 127..186 CDD:276965 12/59 (20%)
KELCH repeat 190..241 CDD:276965 17/53 (32%)
Kelch 3 207..255 16/50 (32%)
KELCH repeat 245..312 CDD:276965 16/66 (24%)
Kelch 4 257..305 10/47 (21%)
Kelch_5 312..355 CDD:433528 4/42 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..472 11/41 (27%)
FN3 <549..603 CDD:238020
FN3 609..709 CDD:238020
Blue background indicates that the domain is not in the aligned region.

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