DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and Klhdc1

DIOPT Version :9

Sequence 1:NP_001259343.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_839984.1 Gene:Klhdc1 / 271005 MGIID:2672853 Length:406 Species:Mus musculus


Alignment Length:355 Identity:95/355 - (26%)
Similarity:139/355 - (39%) Gaps:102/355 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QRVNHAAVGVGDFIYSFGGYCTGYD---YRYNE-----PIDVHALNAHTMRWTLVPQQ------- 61
            :|..|.||..|.|:|.:|||.:..|   |..|:     .||......|.|...|.|..       
Mouse    12 ERSGHCAVVDGHFLYVWGGYVSIEDNEVYLPNDEMWTYDIDSGLWKMHLMEGELPPSMSGSCGAC 76

  Fly    62 ----------LDDAGVPLKYPLV---------------------PFQRYGHTVVAYKDRIYIWGG 95
                      .||.|...:...|                     |..|...:...||||:..:||
Mouse    77 IHGRLYVFGGYDDKGYSNRLYFVNLRTRDGTYTWEKITKFDGQPPTPRDKLSCWVYKDRLIYFGG 141

  Fly    96 ----RNDE-NLC-----------------NTLYCFDPKTAQWSRPQVTGCL-PGARDGHSACVIG 137
                |:.| ..|                 |.::.||.||..||:|::.|.: |..|..||..|:|
Mouse   142 YGYRRHSELQECFDVHDASWEEQIFWGWHNDVHVFDTKTRTWSQPEIKGGVPPQPRAAHSCAVLG 206

  Fly   138 NSMYIFGGFVDEINEFSSDVHSLNLDTMEWR-YVQTFGVPPSYRDFHASVAYEQERMYIFGGRGD 201
            |..|:|||.|  :....:|:|.|||||..|. .:...|..|.:|.:|...|...:::::|||...
Mouse   207 NKGYVFGGRV--LQTRMNDLHYLNLDTWVWSGRISVNGESPKHRSWHTLTAITDDKLFLFGGLNA 269

  Fly   202 KHSPYHSQEETYCHEIVYLDMKTKVW----HRPFTAGKV----PVGRRSHSMFVYNKLIYVFGGY 258
            .:.|.   .:.:.|.|.     |..|    |.|:|..::    .:|:.:.        |.||||.
Mouse   270 DNIPL---SDGWIHNIT-----TNCWKQLRHLPYTRPRLWHTACLGKENE--------IMVFGGS 318

  Fly   259 NG---LLDQ-HFNDLYTFDPRTKLWNLIRA 284
            ..   .||. |.|||..|  :|:.::|:|:
Mouse   319 KDNLLFLDTGHCNDLLIF--QTQPYSLLRS 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_001259343.1 KELCH repeat 13..69 CDD:276965 22/80 (28%)
Kelch_6 13..60 CDD:290672 18/54 (33%)
KELCH repeat 78..125 CDD:276965 19/69 (28%)
Kelch_1 78..117 CDD:279660 16/60 (27%)
KELCH repeat 128..170 CDD:276965 19/42 (45%)
Kelch_3 137..188 CDD:290151 19/51 (37%)
KELCH repeat 180..236 CDD:276965 14/59 (24%)
Kelch_3 192..248 CDD:290151 12/63 (19%)
Kelch_5 237..276 CDD:290565 13/42 (31%)
Klhdc1NP_839984.1 KELCH repeat 13..66 CDD:276965 17/52 (33%)
Kelch_5 13..54 CDD:290565 15/40 (38%)
Kelch 1 24..76 14/51 (27%)
KELCH repeat 70..120 CDD:276965 4/49 (8%)
Kelch_3 79..124 CDD:290151 5/44 (11%)
Kelch 2 80..134 7/53 (13%)
Kelch 3 135..181 10/45 (22%)
Kelch_3 <170..205 CDD:290151 13/34 (38%)
KELCH repeat 197..245 CDD:276965 20/49 (41%)
Kelch_3 206..256 CDD:290151 19/51 (37%)
Kelch 4 208..258 18/51 (35%)
Kelch_4 247..295 CDD:290154 12/55 (22%)
KELCH repeat 248..295 CDD:276965 12/54 (22%)
Kelch 5 260..307 11/54 (20%)
Kelch 6 311..361 15/46 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D933937at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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