DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and Rabepk

DIOPT Version :10

Sequence 1:NP_572494.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_663497.2 Gene:Rabepk / 227746 MGIID:2139530 Length:380 Species:Mus musculus


Alignment Length:356 Identity:94/356 - (26%)
Similarity:145/356 - (40%) Gaps:79/356 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RVNHAA---VGVGDF----IYSFGGYCTGYDYRYNEPIDVHALNAHTMRWTLVPQQLDDAGVPLK 70
            ||.|:.   ..|||.    |:..||......:.     |||.::..|.:|....::         
Mouse    39 RVGHSCSYFPPVGDAESGKIFIVGGANPNQSFS-----DVHTMDLGTHQWDTATRE--------- 89

  Fly    71 YPLVPFQRYGHTVV---AYKDRIYIWGGRNDENLCNTLYCFDPKTAQWSRPQVTGCLPGARDGH- 131
             .|:|  ||.|...   .....|:::||.:.....|.|....|:...||.|:|||..|..|..| 
Mouse    90 -GLLP--RYEHASFLPSCSPHSIWVFGGADQSGNRNCLQVMSPEDRTWSTPEVTGSPPSPRTFHT 151

  Fly   132 SACVIGNSMYIFGGF------VDEINEFSSDVHSLNLDTMEWRYVQTFGVPPSYRDFHASVAYEQ 190
            |:..|||.:|:|||.      |:::.     :|..:.:|:.|...:|.|.|||.|..|..|| ..
Mouse   152 SSAAIGNQLYVFGGGERGAQPVEDVK-----LHVFDANTLTWSQPETHGSPPSPRHGHVMVA-AG 210

  Fly   191 ERMYIFGG-RGDKHSPYHSQEETYCHEIVYLDMKTKVWHRPFTAGKVPVGRRSHSMFVYNKLIYV 254
            .:::|.|| .|||..     ::.:|     :|:....|.:....|.||||..:|:.......:|:
Mouse   211 TKLFIHGGLAGDKFF-----DDLHC-----IDIGDMSWQKLGPTGAVPVGCAAHAAVAVGHHVYM 265

  Fly   255 FGGY--NGLLDQHFNDLYTFDPRTKLWNLIRANGKAPTAR--RRQCAI---VMGTRMFLFGGTSP 312
            |||.  .|.|    |.:|.:....:.|.:::.:...|..|  ...|.|   ||.|          
Mouse   266 FGGMTATGAL----NMMYKYHTEKQHWTVLQFDTSLPAGRLDHSMCVIPWPVMST---------- 316

  Fly   313 RSGSSSSPAAVSPTQETGGAAA------AGG 337
             |.:..|.:.:...|:..|.||      :||
Mouse   317 -SENKDSDSVILTLQDEKGDAAEKAETQSGG 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_572494.1 NanM 13..306 CDD:442289 86/317 (27%)
KELCH repeat 13..69 CDD:276965 14/62 (23%)
KELCH repeat 78..125 CDD:276965 15/49 (31%)
KELCH repeat 128..170 CDD:276965 14/48 (29%)
KELCH repeat 180..236 CDD:276965 14/56 (25%)
RabepkNP_663497.2 NanM 21..274 CDD:442289 74/267 (28%)
Kelch 1 57..103 13/62 (21%)
KELCH repeat 94..143 CDD:276965 15/48 (31%)
Kelch 2 108..154 16/45 (36%)
KELCH repeat 147..198 CDD:276965 16/55 (29%)
Kelch 3 159..211 17/57 (30%)
KELCH repeat 201..243 CDD:276965 13/52 (25%)
Kelch 4 212..258 15/55 (27%)
KELCH repeat 251..291 CDD:276965 10/43 (23%)
Kelch 5 262..311 13/52 (25%)
Kelch 264..309 CDD:128874 12/48 (25%)
Kelch 6 357..380
Blue background indicates that the domain is not in the aligned region.

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