DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12081 and KLHDC8B

DIOPT Version :9

Sequence 1:NP_001259343.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_006713078.1 Gene:KLHDC8B / 200942 HGNCID:28557 Length:371 Species:Homo sapiens


Alignment Length:329 Identity:76/329 - (23%)
Similarity:111/329 - (33%) Gaps:75/329 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 YPLVPFQR-YGHTVVAYKD-RIYIWGGRNDENL-CNTLYCFDPKTAQWSRPQVTGCLPGARDGHS 132
            :|.:|..| ||  .||::| .:.:.||.....| .:|....|..:..|   .....||.||.|.:
Human    14 FPPMPTCRVYG--TVAHQDGHLLVLGGCGRAGLPLDTAETLDMASHTW---LALAPLPTARAGAA 73

  Fly   133 ACVIGNSMYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQT-----FGVPPSYR-DFHASVAYEQE 191
            |.|:|..:.:.|| |||:....:.|.:..:|...|....|     .||....| ::.........
Human    74 AVVLGKQVLVVGG-VDEVQSPVAAVEAFLMDEGRWERRATLPQAAMGVATVERGEWPPKEGTSDG 137

  Fly   192 RMYIFGGRGDKHSPYHSQEETYCHEIVYLDMKTKVWHRPFTAGKVPVGRRSHSMFVYNKLIYVF- 255
            .:|..||.|...:| .:|...|       :.:...|   .:...:|......|.|::...|||. 
Human   138 MVYALGGMGPDTAP-QAQVRVY-------EPRRDCW---LSLPSMPTPCYGASTFLHGNKIYVLG 191

  Fly   256 ------GGYNGLLDQHFNDLYTFDPRTKLWNLIRANGKAPTARRRQCAIVMGTRMFLFGGTSPRS 314
                  ||..|.|.  ......||...:.|.      :.|:...|:.          |.|.:...
Human   192 TPIPLTGGRQGKLP--VTAFEAFDLEARTWT------RHPSLPSRRA----------FAGCAMAE 238

  Fly   315 GSSSSPAAVSPTQETGGAAAAGGVVPPGVALIDYSDLHVLDFEPTLKTLATMVVLKHQLDISGLP 379
            ||..|               .||:..||.        |.....|.......|..|:|. ..:.||
Human   239 GSVFS---------------LGGLQQPGP--------HNFYSRPHFVNTVEMFDLEHG-SWTKLP 279

  Fly   380 RSFR 383
            ||.|
Human   280 RSLR 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_001259343.1 KELCH repeat 13..69 CDD:276965
Kelch_6 13..60 CDD:290672
KELCH repeat 78..125 CDD:276965 12/49 (24%)
Kelch_1 78..117 CDD:279660 12/41 (29%)
KELCH repeat 128..170 CDD:276965 13/41 (32%)
Kelch_3 137..188 CDD:290151 13/56 (23%)
KELCH repeat 180..236 CDD:276965 9/56 (16%)
Kelch_3 192..248 CDD:290151 11/55 (20%)
Kelch_5 237..276 CDD:290565 12/45 (27%)
KLHDC8BXP_006713078.1 PRK14131 1..321 CDD:237617 76/329 (23%)
Kelch_6 20..69 CDD:290672 14/53 (26%)
KELCH repeat 21..65 CDD:276965 12/48 (25%)
Kelch_1 68..114 CDD:279660 15/46 (33%)
KELCH repeat 69..114 CDD:276965 14/45 (31%)
KELCH repeat 117..173 CDD:276965 11/66 (17%)
Kelch 139..184 CDD:128874 11/55 (20%)
KELCH repeat 175..227 CDD:276965 13/59 (22%)
Kelch 186..239 CDD:128874 14/70 (20%)
Kelch_1 228..279 CDD:279660 15/84 (18%)
KELCH repeat 229..279 CDD:276965 14/83 (17%)
Kelch_6 288..336 CDD:290672
KELCH repeat 288..334 CDD:276965
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D933937at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.