DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and F53E4.1

DIOPT Version :9

Sequence 1:NP_001259343.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001368706.1 Gene:F53E4.1 / 180050 WormBaseID:WBGene00009978 Length:432 Species:Caenorhabditis elegans


Alignment Length:440 Identity:177/440 - (40%)
Similarity:251/440 - (57%) Gaps:56/440 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WTVHLDGGPQRVNHAAVGVGDFIYSFGGYCTGYDYRYNEPIDVHALNAHTMRW-TLVPQQLDDAG 66
            |||||:|||:|||||::.||..||||||||:|......:|:|||.||....|| .:.|..:.:..
 Worm    10 WTVHLEGGPRRVNHASIAVGSRIYSFGGYCSGEVTDAKDPLDVHVLNTENYRWIKMNPGYVYNNR 74

  Fly    67 VPLK-------------YPLVPFQRYGHTVVAYKDRIYIWGGRNDE-NLCNTLYCFDPKTAQWSR 117
            :..|             :..||:||||||||.|:.:.|:||||||: ..||.|:.:||:...|.:
 Worm    75 IITKATIESPYSDSDKMFGAVPYQRYGHTVVEYQGKAYVWGGRNDDYGACNLLHEYDPEYNVWKK 139

  Fly   118 PQVTGCLPGARDGHSACVIGNSMYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQTFGVPPSYRDF 182
            .::.|.:|.:||||:|.|..|.|::|||:.::...||.:.:..:..|..||.:.|...||.:|||
 Worm   140 VEIEGFVPPSRDGHTAVVWNNQMFVFGGYEEDAQRFSQETYVFDFATSTWREMHTKNDPPRWRDF 204

  Fly   183 H-ASVAYEQERMYIFGGR-------GDKHSPYHSQEETYCHEIVYLDMKTKVWHR---PFTAGKV 236
            | |||.  ...|||||||       ||:|. :|:..:.|...::.|::.|..|.|   |....| 
 Worm   205 HTASVI--DGMMYIFGGRSDESGQVGDEHL-FHTIHDQYDDTLMALNLATGAWTRTKVPENTMK- 265

  Fly   237 PVGRRSHSMFVYNKLIYVFGGYNGLLDQHFNDLYTFDPRTKLWNLIRANGKAPTARRRQCAIVMG 301
            |.||||||.:||:..:|:||||.|.::.|:|:||.|||:|.:|::|...|..|:||||.|::|..
 Worm   266 PGGRRSHSTWVYDGKMYMFGGYLGTINVHYNELYCFDPKTSMWSVISVRGTYPSARRRHCSVVSN 330

  Fly   302 TRMFLFGGTSPRSGSSSSPAAVSPTQETGGAAAAGGVVPPGVALIDYSDLHVLDFEPTLKTLATM 366
            .:::|||||.|           .|..........|.:.|.|:|  |.||||||||.|:|||||..
 Worm   331 GKVYLFGGTMP-----------LPCHPLSTTNYNGMISPSGLA--DLSDLHVLDFAPSLKTLAMQ 382

  Fly   367 VVLKH-QLDISGLPRSFRSDL------QMLTQ--PNSISR---PIN-QAG 403
            .||.. ::...|:..:.:::|      :|..|  ||.:|.   |.| |||
 Worm   383 SVLNELKVPSKGMFETLQNELAADIRFEMYCQVMPNVVSNGGSPRNDQAG 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_001259343.1 KELCH repeat 13..69 CDD:276965 25/56 (45%)
Kelch_6 13..60 CDD:290672 24/47 (51%)
KELCH repeat 78..125 CDD:276965 22/47 (47%)
Kelch_1 78..117 CDD:279660 21/39 (54%)
KELCH repeat 128..170 CDD:276965 16/41 (39%)
Kelch_3 137..188 CDD:290151 20/51 (39%)
KELCH repeat 180..236 CDD:276965 24/66 (36%)
Kelch_3 192..248 CDD:290151 25/65 (38%)
Kelch_5 237..276 CDD:290565 22/38 (58%)
F53E4.1NP_001368706.1 KELCH repeat 99..148 CDD:276965 22/48 (46%)
KELCH repeat 150..192 CDD:276965 16/41 (39%)
KELCH repeat 202..266 CDD:276965 25/67 (37%)
KELCH repeat 269..312 CDD:276965 22/42 (52%)
Kelch_2 19..67 CDD:400133 24/47 (51%)
KELCH repeat 20..91 CDD:276965 26/70 (37%)
PLN02153 79..>338 CDD:177814 105/262 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159194
Domainoid 1 1.000 46 1.000 Domainoid score I8218
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14290
Inparanoid 1 1.050 304 1.000 Inparanoid score I1602
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54529
OrthoDB 1 1.010 - - D393851at33208
OrthoFinder 1 1.000 - - FOG0001118
OrthoInspector 1 1.000 - - oto18836
orthoMCL 1 0.900 - - OOG6_102848
Panther 1 1.100 - - LDO PTHR46461
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1494
SonicParanoid 1 1.000 - - X5342
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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