DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and rabepk

DIOPT Version :9

Sequence 1:NP_001259343.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_002941691.1 Gene:rabepk / 100492747 XenbaseID:XB-GENE-1009616 Length:364 Species:Xenopus tropicalis


Alignment Length:289 Identity:77/289 - (26%)
Similarity:124/289 - (42%) Gaps:38/289 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EPIDVHALNAHTMRW-TLVPQQLDDAGVPLKYPLVPFQRYGHTVV-------AYKDRIYIWGGRN 97
            ||.|:    ..|..| .|||:   ..|        |..|.|||.:       :.|.::.:.||.:
 Frog     8 EPEDL----PKTSTWYALVPR---GEG--------PSARVGHTCMYVPSSEDSSKGKVLVLGGAD 57

  Fly    98 DENLCNTLYCFDPKTAQWSRPQVTGCLPGARDGHSACVIGNS---MYIFGGFVDEINEFSSDVHS 159
            .....:.:|..|....:|..|.:.|.||  |..|::.:.|.|   :::|.|  .|..|..:.|..
 Frog    58 PSGCFSDIYMIDLDNHEWDNPDLEGLLP--RYEHASFISGRSPGNIWVFAG--AEQAENRNCVQV 118

  Fly   160 LNLDTMEWRYVQTFGVPPSYRDFHASVAYEQERMYIFGGRGDKHSPYHSQEETYCHEIVYLDMKT 224
            ||.....|:..:..|.|||.|.||.|.|..::::|:||| |:|.:...:....|.:     |...
 Frog   119 LNPGMPSWKSPKVGGTPPSPRTFHTSSASIEDKLYVFGG-GEKGAEPVTDTNLYIY-----DAAN 177

  Fly   225 KVWHRPFTAGKVPVGRRSHSMFVYNKLIYVFGGYNGLLDQHFNDLYTFDPRTKLWNLIRANGKAP 289
            ..|.:|.|:|..|..|..|.:......:||.||..|  ...|.|::..|..|..|..::..|..|
 Frog   178 MTWTQPVTSGDPPQARHGHVVTAVGSKLYVHGGMAG--STFFKDMFCIDTDTMKWECLKTKGDLP 240

  Fly   290 TARRRQCAIVMGTRMFLFGGTSPRSGSSS 318
            .|.....::...:.:::|||.:....::|
 Frog   241 PACAAHSSVAWKSYIYIFGGMTSTGATNS 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_001259343.1 KELCH repeat 13..69 CDD:276965 9/28 (32%)
Kelch_6 13..60 CDD:290672 7/19 (37%)
KELCH repeat 78..125 CDD:276965 12/53 (23%)
Kelch_1 78..117 CDD:279660 10/45 (22%)
KELCH repeat 128..170 CDD:276965 12/44 (27%)
Kelch_3 137..188 CDD:290151 18/53 (34%)
KELCH repeat 180..236 CDD:276965 17/55 (31%)
Kelch_3 192..248 CDD:290151 15/55 (27%)
Kelch_5 237..276 CDD:290565 11/38 (29%)
rabepkXP_002941691.1 PLN02193 <9..307 CDD:177844 76/288 (26%)
KELCH repeat 31..83 CDD:276965 11/51 (22%)
KELCH repeat 86..128 CDD:276965 12/43 (28%)
PLN02153 127..>275 CDD:177814 41/151 (27%)
KELCH repeat 139..189 CDD:276965 17/55 (31%)
KELCH repeat 193..240 CDD:276965 13/48 (27%)
KELCH repeat 243..283 CDD:276965 4/27 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D933937at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1494
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.950

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