DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and klhdc9

DIOPT Version :9

Sequence 1:NP_001259343.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_004919401.1 Gene:klhdc9 / 100486977 XenbaseID:XB-GENE-997349 Length:346 Species:Xenopus tropicalis


Alignment Length:320 Identity:67/320 - (20%)
Similarity:109/320 - (34%) Gaps:83/320 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VHLDGGPQRVNHAAVGVGDFIYSFGGYCTGYD--YRYNEPIDVHALNAHTMRWTLVPQQLDDAGV 67
            |.::.|.:|.:|....:||......|   |:|  .|.:......::......|...|......|:
 Frog    65 VSVESGFRRSHHDGALLGDRWLCVAG---GWDGTRRVSSVFSYDSVEGEWALWAEGPTNNPPVGL 126

  Fly    68 PLKYPLVPFQRYGHTVVAYKDR----IYIWGGRNDENLCNTLYCF--DPKT-AQWSRPQVTGCLP 125
            .           .||.....|.    |...||...:....::|..  :|.| ..|.:.:|:  ..
 Frog   127 S-----------SHTCTKISDYELRVIGREGGSRTQRRYASVYSLRVNPSTRTYWYKEEVS--RT 178

  Fly   126 GARDGHSACVI----------GNSMYIFGG----FVDEINEFSSD-VH-----SLNLDTMEWRYV 170
            .:|.||||.::          |.|:|:|||    .:|...|:|.: :|     ...|.....|.|
 Frog   179 ASRSGHSATLLPTDTKQGKKGGYSLYVFGGRDSAAIDIAGEWSKEKIHVSATPCPRLTEQLARLV 243

  Fly   171 QTFG----VPPSYRDFHASVAYEQERMYIFGGRGDKHSPYHSQEETYCHEIVYLDMKT--KVWHR 229
            .|.|    .|.|.|  |.|.|.....:.::||     .......:..|:::...|.:|  :.|..
 Frog   244 ATEGAARSAPKSLR--HQSCAVIGPFLVVYGG-----ETLTKSRDAVCNDLYIYDTRTSPRCWSH 301

  Fly   230 PFTAGKVPVGRRSHSMFVYNKLIYVFGGYNGLLDQHFNDLYTFDPRTKLWNLIRANGKAP 289
             |...:....|..|.:.:.|..:|:.||:.                        |:||.|
 Frog   302 -FPGSERQHKRVGHRICLLNDRLYLVGGFG------------------------ADGKTP 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_001259343.1 KELCH repeat 13..69 CDD:276965 11/57 (19%)
Kelch_6 13..60 CDD:290672 9/48 (19%)
KELCH repeat 78..125 CDD:276965 11/53 (21%)
Kelch_1 78..117 CDD:279660 10/45 (22%)
KELCH repeat 128..170 CDD:276965 17/61 (28%)
Kelch_3 137..188 CDD:290151 20/64 (31%)
KELCH repeat 180..236 CDD:276965 11/57 (19%)
Kelch_3 192..248 CDD:290151 9/57 (16%)
Kelch_5 237..276 CDD:290565 6/38 (16%)
klhdc9XP_004919401.1 KELCH repeat 21..64 CDD:276965
Kelch_1 72..111 CDD:366584 8/41 (20%)
KELCH repeat 73..122 CDD:276965 10/51 (20%)
KELCH repeat 126..178 CDD:276965 11/64 (17%)
KELCH repeat 234..308 CDD:276965 18/81 (22%)
Kelch_5 257..294 CDD:372758 8/43 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D933937at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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