DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and hcfc1

DIOPT Version :10

Sequence 1:NP_572494.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_012824440.1 Gene:hcfc1 / 100485535 XenbaseID:XB-GENE-6076923 Length:2204 Species:Xenopus tropicalis


Alignment Length:253 Identity:75/253 - (29%)
Similarity:119/253 - (47%) Gaps:20/253 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VPFQRYGHTVVAYKDRIYIWGGRNDENLCNTLYCFDPKTAQWSRPQVTGCLPGARDGHSACVIGN 138
            ||..|:||..||.|:.|.::||.| |.:.:.|:.::..|.||..|.|.|.:|.....:.....|.
 Frog    27 VPRPRHGHRAVAIKELIVVFGGGN-EGIVDELHVYNTSTNQWFIPAVRGDIPPGCAAYGFVCDGT 90

  Fly   139 SMYIFGGFVDEINEFSSDVHSLNLDTMEWRYVQT----FGVPPSYRDFHASVAYEQERMYIFGGR 199
            .:.:|||.| |..::|:|::.|.....||:.::.    .|.||..|..| |.:....:.|:|||.
 Frog    91 RLLVFGGMV-EYGKYSNDLYELQASRWEWKRLKAKAPKNGPPPCPRLGH-SFSLVGNKCYLFGGL 153

  Fly   200 GDKHSPYHSQEETYCHEIVYLDMK----TKVWHRPFTAGKVPVGRRSHSMFVY----NK--LIYV 254
            .:......:....|.:::..|:::    ...|..|.|.|.:|..|.||:..||    ||  .:.:
 Frog   154 ANDSEDPKNNIPRYLNDLYILELRPGSGVVAWDVPITYGILPPPRESHTAVVYTDKDNKKSRLVI 218

  Fly   255 FGGYNGLLDQHFNDLYTFDPRTKLWNLIRANGKAPTARRRQCAIVMGTRMFLFGGTSP 312
            :||.:|.   ...||:..|..|..|:....||.||..|....|..:..:|::|||..|
 Frog   219 YGGMSGC---RLGDLWILDIDTLTWSKPSLNGVAPLPRSLHSATTILNKMYVFGGWVP 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_572494.1 NanM 13..306 CDD:442289 71/245 (29%)
KELCH repeat 13..69 CDD:276965
KELCH repeat 78..125 CDD:276965 18/46 (39%)
KELCH repeat 128..170 CDD:276965 11/41 (27%)
KELCH repeat 180..236 CDD:276965 13/59 (22%)
hcfc1XP_012824440.1 NanM 23..342 CDD:442289 75/253 (30%)
KELCH repeat 31..78 CDD:276965 18/47 (38%)
KELCH repeat 82..132 CDD:276965 12/50 (24%)
KELCH repeat 135..196 CDD:276965 13/61 (21%)
KELCH repeat 198..251 CDD:276965 18/55 (33%)
KELCH repeat 253..317 CDD:276965 7/21 (33%)
PHA03247 <425..595 CDD:223021
COG4625 527..>1068 CDD:443664
FN3 <2026..2055 CDD:238020
FN3 2061..2165 CDD:238020
Blue background indicates that the domain is not in the aligned region.

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