DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps11 and Vps11

DIOPT Version :10

Sequence 1:NP_730776.1 Gene:Vps11 / 317987 FlyBaseID:FBgn0052350 Length:830 Species:Drosophila melanogaster
Sequence 2:XP_312259.6 Gene:Vps11 / 1273295 VectorBaseID:AGAMI1_005678 Length:1089 Species:Anopheles gambiae


Alignment Length:908 Identity:223/908 - (24%)
Similarity:381/908 - (41%) Gaps:202/908 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ISVFEWKKVDLFNII----------VVPFVKIPNTAEISCYCFPESKSSTEERNIKLVICDKNRN 57
            :::|||:|.:.|::.          .:...||..||..|..               :||||.|..
Mosquito     1 MAIFEWRKFNFFDLRQGVDKDNVSGALQGAKITATANGSSL---------------IVICDSNGY 50

  Fly    58 ILIYLSNWECITFKSPSTRKAIALCSLTS-NNSLATVTPDINNGIHIDIFDLNRLTKKQAAPIIA 121
            |..:...|..|:||  ....:|.||.:.. ||.|.||..|| ||....:::|::|:....|..:.
Mosquito    51 IHTFSRTWSAISFK--GHEGSILLCDIAKPNNLLVTVGEDI-NGPSFKVWNLSKLSATNGAQCLR 112

  Fly   122 SAYTQPSSTPLCLNADVIDDKLFALAIGLGNGDILLHYGKITKNFSANIRQHTVSGNAVNGI--- 183
            :..|. .|.|..|   .:.|....:|||...|:|.|:.|.|:::.|..::|.|...:.:.||   
Mosquito   113 TVRTM-VSVPTAL---AVSDGGQFMAIGFAQGNISLYRGDISRDRSKTLKQLTAGTSDIAGIAFK 173

  Fly   184 HFDFKTQPLDTTQIMFVTCVQGVYCFML--KEKCIMDTKFVLDNDKGNLNYRSIMCKAGGGEIND 246
            |....||       |||....|||.:.|  ::|   :.:.:|...|     :.:.|.|.....|:
Mosquito   174 HCHKHTQ-------MFVCSNSGVYVYNLHSRDK---EIRVILATMK-----KPVGCCALQTGHNE 223

  Fly   247 SMLVVGRADAVYCYTPEGRGPCFAIEGAKECLAWVGHYLIVGVKNSNLKQNATTLIVLDTENKII 311
            ...:||..|||||||.:|||||:|:||.|..|.|...:|:|.::|.. .....||.|:|.:||.|
Mosquito   224 GHFMVGLEDAVYCYTSDGRGPCYALEGNKTLLHWYRSHLLVVMRNPR-SPGGFTLTVIDIQNKFI 287

  Fly   312 VFQRQFQELFYVISENNFCYIVTNSGDTDACNMLMLEKNSIDVNIRLLVEKHMYNIALRLLHREG 376
            ||....:|:..:::|...|||:     |:...:|.|::..:...:.:|.:|::|:||:|:.....
Mosquito   288 VFTSPIEEVSAILTEFGTCYIL-----TEGKQILHLDEKDLQSKLNVLFKKNLYDIAVRIAKCNQ 347

  Fly   377 YTSSPETALVRFQYGNHLLQKGDFSRATQEFIKTIGFIKPYAVISKLLYSRYNTYLLNYLTEWKK 441
            |.:.....:.: |||:||..||||:.|.:::.||||:::|..||.:.|.:|:..||.:||.....
Mosquito   348 YDAEGLAGIFK-QYGDHLYSKGDFAGAVEQYAKTIGYLEPSYVIQRFLDARHIHYLTDYLQTIHA 411

  Fly   442 KNESSSCHTRLIECCIKR----DQIEHEMQQD----------------DFKHYKSPAKI-----K 481
            :..:::.||.|:..|..|    .|::..::.|                |..:.:...::     |
Mosquito   412 QGRATADHTTLLLNCFTRLDRTTQLKEFLKNDQKSNLFDIDVAIKVCRDASYVEEALQLAKAHRK 476

  Fly   482 HLATLSKM---------------YFACTPSNQVPVEEEHLLHQLLEYGPASLA------VDL--- 522
            |.|.||.:               ..||..:.          |.:..||...:|      :.|   
Mosquito   477 HDACLSILTEDMGQFEEALNYIESLACAEAE----------HSIKRYGSVLMANCPSRTIALLKK 531

  Fly   523 --TTYLNNITFENVKESKNILSFCSILADHN--------------------DYCAKMLAKIIEAF 565
              |.|..|   .|..:.::.|:...:|||.|                    :.....|..:|...
Mosquito   532 LCTEYATN---RNSTQGRDALTVADLLADLNLNDERGHGNPEEFIHLFDDTELLIDFLEHLIRFV 593

  Fly   566 PVCDEKLLFYLLVFYFKLWRLDKVTSSFVSDFIKTHSLRMDK--TIIVSRLYTFFNVTQRIHGHQ 628
            |...:.:...|:..|...|:........:.|.:|.::.|.||  .:...|::.|:.....::...
Mosquito   594 PASSQCVYSTLIEHYLYRWKESTAVEEKLLDLLKFNTDRYDKNHALAQCRMHEFWPGVMYLYEED 658

  Fly   629 KNTGTLHN------------ETIDKCIENLIKNNPDVAL-------NENLSKRSFLMMLKSSCST 674
            |    |::            |.:..|...|..||..:.|       |:..:.......:....|.
Mosquito   659 K----LYHLIIRHYLRHRQYEELLACCRKLAHNNASLWLLTLNGLKNDAQAPPHLFNQILQVISQ 719

  Fly   675 EEIKA----------------IKIKPIF------KDRLLRSIVDSANELKLVENFNEKIKRSRSM 717
            :.::|                :.:|..|      :...:||..:.|...:     .|.:...|.:
Mosquito   720 KRLQAPLQVLDCLAVDNGPNFLSVKEYFMQVFQKEQDTIRSEEEQARAYR-----EESVSIKRYI 779

  Fly   718 LSLYTNNPIEFRNDKCDICREMLSMQSIYFLCQHSFHEECL-NYKSTKRQEKFLCIICKTRNL 779
            ..|...| :||:|..||.|::.|||.:::|||:||:|::|: :|..|:|.    |.:|...|:
Mosquito   780 KHLQEGN-VEFQNTTCDACKQPLSMPALFFLCKHSYHQDCIRSYTDTERD----CPVCNKNNM 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps11NP_730776.1 RING-H2_Vps11 731..777 CDD:438349 18/46 (39%)
Vps11XP_312259.6 None

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