DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vps11 and vps11

DIOPT Version :9

Sequence 1:NP_730776.1 Gene:Vps11 / 317987 FlyBaseID:FBgn0052350 Length:830 Species:Drosophila melanogaster
Sequence 2:NP_001120879.1 Gene:vps11 / 100101673 XenbaseID:XB-GENE-922526 Length:914 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps11NP_730776.1 zf-RING_5 732..776 CDD:291308
vps11NP_001120879.1 CLH 393..516 CDD:128594
Clathrin 399..517 CDD:279031
CLH 559..705 CDD:128594
RING 794..833 CDD:238093
VPS11_C 835..880 CDD:289236
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 139 1.000 Inparanoid score I4403
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D227087at33208
OrthoFinder 1 1.000 - - FOG0005040
OrthoInspector 1 1.000 - - oto103630
Panther 1 1.100 - - LDO PTHR23323
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3565
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.160

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