DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12065 and UPP1

DIOPT Version :9

Sequence 1:NP_001368976.1 Gene:CG12065 / 31798 FlyBaseID:FBgn0030052 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_001274355.1 Gene:UPP1 / 7378 HGNCID:12576 Length:310 Species:Homo sapiens


Alignment Length:118 Identity:25/118 - (21%)
Similarity:46/118 - (38%) Gaps:36/118 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   622 GRDLVRSDELRTQFARKYGLLATDVEMSSVLDSIIGN--CRESFILVKGIAD------------- 671
            |:.::|..:|..:..::  ||....|:|. ..:::||  |...|...:|..|             
Human   173 GKRVIRKTDLNKKLVQE--LLLCSAELSE-FTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQA 234

  Fly   672 -----YKDGTSTRKWQN--FAAI-SAASVVKSVIC----------GMDAPTNV 706
                 |..|....:.::  |||: ||..:..:|:|          .:.:|.||
Human   235 YLEAAYAAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRLEGDQISSPRNV 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12065NP_001368976.1 NP-I 376..696 CDD:365790 20/96 (21%)
UPP1NP_001274355.1 UP_hUPP-like 31..305 CDD:350163 25/118 (21%)
Phosphate binding. /evidence=ECO:0000269|PubMed:19291308, ECO:0007744|PDB:3EUF 138..141
Uridine binding. /evidence=ECO:0000305|PubMed:20856879, ECO:0007744|PDB:3EUF, ECO:0007744|PDB:3NBQ 142..143
Uridine binding. /evidence=ECO:0000305|PubMed:19291308, ECO:0000305|PubMed:20856879, ECO:0007744|PDB:3EUF, ECO:0007744|PDB:3NBQ 217..219 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152628
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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