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Protein Alignment CG12065 and Upp1
DIOPT Version :9
Sequence 1: | NP_001368976.1 |
Gene: | CG12065 / 31798 |
FlyBaseID: | FBgn0030052 |
Length: | 706 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001025196.1 |
Gene: | Upp1 / 289801 |
RGDID: | 1305566 |
Length: | 312 |
Species: | Rattus norvegicus |
Alignment Length: | 193 |
Identity: | 41/193 - (21%) |
Similarity: | 69/193 - (35%) |
Gaps: | 50/193 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 36 IGTGTGNGTLPNGNKNYNKIVAVQDQEPLAQNSSGVQRSQSPPRTEQVVMTPRGKTANSTVILIE 100
|||..|.|..|. :.::..|..:...: |..||:|:..| .|.|:: ::
Rat 141 IGTSGGIGLEPG-----SVVITQQAVDECFK-----------PEFEQIVLGKR-VTRNTS---LD 185
Fly 101 RKLVDE-------INDRVHVAG------------GDHTGIIIN---KDTVAGQKSASKAAALSLE 143
.:||.| :|:...|.| |...|.:.: ||..|..::|..|...::|
Rat 186 AQLVQELMQCSSDLNEFPTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLRAAHAAGVRNIE 250
Fly 144 FRVFLVSANTGKHSQESRTLRFWFRDWLTNEE-KQAHIAQDFFKELVSPQDFPRDYVG-FIKK 204
....:.:........::..:.....|.|..:: ...| ..||..|..|:..|| ||||
Rat 251 MESSVFATMCSACGLKAAVVCVTLLDRLQGDQINTPH------NVLVEYQQRPQRLVGHFIKK 307
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG12065 | NP_001368976.1 |
NP-I |
376..696 |
CDD:365790 |
|
Upp1 | NP_001025196.1 |
UP_hUPP-like |
33..307 |
CDD:350163 |
39/191 (20%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166346149 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.930 |
|
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