DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG32313 and crispld1b

DIOPT Version :9

Sequence 1:	NP_001261262.1	Gene:	CG32313 / 317973	FlyBaseID:	FBgn0052313	Length:	182	Species:	Drosophila melanogaster
Sequence 2:	XP_009296842.1	Gene:	crispld1b / 393442	ZFINID:	ZDB-GENE-040426-1204	Length:	509	Species:	Danio rerio

Alignment Length:	161	Identity:	41/161 - (25%)
Similarity:	59/161 - (36%)	Gaps:	47/161 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly    26 LILEAHNRRRAKY-----GNQPMVLDEELCTECSEYA-------------DEIVRNEGVYTENYL 72
            |||:.||:.|.:.     ..:.||.|.||......:|             ..|.:|.|.:
Zfish    65 LILDLHNKLRGQVYPPASNMEYMVWDTELERSAEHWAHTCLWEHGPSHLLTRIGQNLGAH----- 124

  Fly    73 EYLYATDPISAKHLQV----VCVFREALPRECVRIWFH--YRGFAENTKYYRFTAMIWNASTRLG 131
               :..|.....|:|.    |..|....|:||..   |  ||.......:|  |.::|..|.::|
Zfish   125 ---WGRDRPPTFHVQAWYDEVRDFSYPYPQECNP---HCPYRCSGPVCTHY--TQLVWATSNKIG 181

  Fly   132 VGL---------GRI-QETRYLVVRYAPPGN 152
            ..:         |.| .:..|||..|:||||
Zfish   182 CAINVCYNMNVWGMIWAKAVYLVCNYSPPGN 212

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG32313	NP_001261262.1	SCP	27..153	CDD:294090	40/160 (25%)
crispld1b	XP_009296842.1	SCP_euk	64..208	CDD:240180	36/155 (23%)
		LCCL	301..385	CDD:128866
		LCCL	404..501	CDD:281766
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170585669
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2340
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.840