DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32313 and scl-3

DIOPT Version :9

Sequence 1:NP_001261262.1 Gene:CG32313 / 317973 FlyBaseID:FBgn0052313 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_502504.1 Gene:scl-3 / 178252 WormBaseID:WBGene00009896 Length:211 Species:Caenorhabditis elegans


Alignment Length:202 Identity:41/202 - (20%)
Similarity:61/202 - (30%) Gaps:71/202 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TIGIG--------LRSLILEAHNRRRAKYGNQPMVL----------------DEELCTECSEYAD 58
            |:.||        .:..|::.||:.|........|.                |..|.|....:|:
 Worm    11 TLQIGAYAQFRESTQQFIVDLHNKLRTSIAKGTYVAKGTTKAAGSNLLKMKWDTTLATAAQTFAN 75

  Fly    59 EIVR---NEGVYTENYLEYLYATDPISAKHLQ-----------------VVCVFREALPRECVRI 103
            ...|   |.....|| |.:.:::.|.|...:.                 ....|.:||       
 Worm    76 TCPRGHSNAAGVGEN-LYWRWSSLPFSGMDIYGGAASVAWEQEFQQYGWTTNTFTQAL------- 132

  Fly   104 WFHYRGFAENTKYYRFTAMIWNASTRLGVGL---GRIQE----TRYLVV-RYAPPGNILREMASN 160
                    .||.....|.|.|..:..:|.|:   |...|    .|.:|| :|...||.|   ..:
 Worm   133 --------ANTGIGHATQMAWANTGLIGCGVKNCGPDPELNNYNRAVVVCQYKAQGNYL---GQD 186

  Fly   161 VPKRPTT 167
            :.|..||
 Worm   187 IYKSGTT 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32313NP_001261262.1 SCP 27..153 CDD:294090 33/169 (20%)
scl-3NP_502504.1 SCP 23..176 CDD:214553 31/168 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161815
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.