DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32313 and scl-2

DIOPT Version :9

Sequence 1:NP_001261262.1 Gene:CG32313 / 317973 FlyBaseID:FBgn0052313 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_502503.1 Gene:scl-2 / 178251 WormBaseID:WBGene00009895 Length:207 Species:Caenorhabditis elegans


Alignment Length:193 Identity:43/193 - (22%)
Similarity:64/193 - (33%) Gaps:57/193 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ILFLIAIEV-CNQTIGIGLRSLILEAHNRRRAKY--------GNQ--------PMVLDEELCTEC 53
            :|.::|:.| |:...|...::.|:.|||..|:|.        |.|        .|..|..:....
 Worm     4 LLLVVALAVGCSADFGSSGQNGIINAHNTLRSKIAKGTYVAKGTQKSPGTNLLKMKWDSAVAASA 68

  Fly    54 SEYADEIVRNEGVYT---------ENYLEYLYATDPISAKHLQVVCVFREALPRECVRIWFHYRG 109
            ..||:      |..|         ||.  |.|.|........|.......:..:|     |...|
 Worm    69 QNYAN------GCPTGHSGDAGLGENL--YWYWTSGSLGDLNQYGSAASASWEKE-----FQDYG 120

  Fly   110 FAE--------NTKYYRFTAMIWNASTRLGVGL--------GRIQETRYLVVRYAPPGNILRE 156
            :..        ||.....|.|.|..|..:|.|:        |..:.|  :|.:|.|.||.:.:
 Worm   121 WKSNLMTIDLFNTGIGHATQMAWAKSNLIGCGVKDCGRDSNGLNKVT--VVCQYKPQGNFINQ 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32313NP_001261262.1 SCP 27..153 CDD:294090 37/166 (22%)
scl-2NP_502503.1 SCP 21..174 CDD:214553 35/167 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161827
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

Return to query results.
Submit another query.