DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32313 and r3hdml

DIOPT Version :9

Sequence 1:NP_001261262.1 Gene:CG32313 / 317973 FlyBaseID:FBgn0052313 Length:182 Species:Drosophila melanogaster
Sequence 2:XP_017953344.1 Gene:r3hdml / 100492715 XenbaseID:XB-GENE-1011048 Length:253 Species:Xenopus tropicalis


Alignment Length:202 Identity:40/202 - (19%)
Similarity:72/202 - (35%) Gaps:71/202 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LIAIEVCNQT---IGIGL-------------RSLILEAHNRRRAKY-----GNQPMVLDEELCTE 52
            |:::...|||   .|.|:             .|.:|:.||:.|:|.     ..:.||.||.|...
 Frog    32 LLSLSNRNQTEHMFGSGIPRIRRKRYISPRDMSALLDYHNQVRSKVFPPAANMEYMVWDERLAKS 96

  Fly    53 CSEYADEIVRNEGVYTENYLEYLYATDPI-SAKHLQVVCVFREALPRECVRIWFHYRGFAENTKY 116
            ...:|::...:.|  ....:.|:.....: |.::..:|         :.|:.|:..|      ::
 Frog    97 AESWANQCKWDHG--PNQLMRYIGQNLSVHSGRYRSIV---------DLVKGWYDER------QH 144

  Fly   117 YRF----------------------TAMIWNASTRLGVGL----------GRIQETRYLVVRYAP 149
            |.|                      |.|:|.:|.|:|..:          ...::..|||..|:.
 Frog   145 YSFPHPRECNPSCPNKCTGAVCTHYTQMVWASSNRIGCAVNICTNINVWGSTWRQASYLVCNYSI 209

  Fly   150 PGNILRE 156
            .||.:.|
 Frog   210 KGNWIGE 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32313NP_001261262.1 SCP 27..153 CDD:294090 31/163 (19%)
r3hdmlXP_017953344.1 CAP_R3HDML 63..208 CDD:349409 30/161 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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