DRSC/TRiP Functional Genomics Resources

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Protein Alignment spirit and Vch

DIOPT Version :10

Sequence 1:NP_572492.1 Gene:spirit / 31797 FlyBaseID:FBgn0030051 Length:393 Species:Drosophila melanogaster
Sequence 2:NP_058841.1 Gene:Vch / 29265 RGDID:598277196 Length:247 Species:Rattus norvegicus


Alignment Length:261 Identity:81/261 - (31%)
Similarity:117/261 - (44%) Gaps:65/261 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 VVGGMPTRPREFPFMAAL------GWRSNFDQRIYYRCGGALIANNFVLTAAHCADLGGEPPSQV 190
            ::||:.:.|...|:||.|      |.:.:        |||.||...||||||||.  |.|  ..|
  Rat    21 IIGGVESIPHSRPYMAHLDIITERGLKDS--------CGGFLITRQFVLTAAHCR--GRE--ITV 73

  Fly   191 RLGGDNLTLTE--GEDISIRRVIIHPDYSASTAYNDIALLELETAAKPELKP------------- 240
            .||..:::..|  .:.|.:.:..||.:|:.....:||.||:||  .:.||.|             
  Rat    74 TLGAHDVSKREYTQQKIKVEKQFIHKNYNFLPNLHDIMLLKLE--KQVELTPAVDVVPLPSPSDF 136

  Fly   241 ----TCIWTQKEVTNTLVTAIGYGQTSFAGLSSAQLLKVPLKSVSNEECQ--HHYQKDQLAQGVL 299
                |..||           .|:|:|.....:|..|.:|.|:.:..|.|:  .||..:       
  Rat   137 IHPGTLCWT-----------AGWGRTGVKDPTSDTLREVALRIMDEEACKIYRHYDNN------- 183

  Fly   300 GTQMCAGDITGERDTCQGDSGGPLLMQDGLLGYVVGITSLGQGCASGPPSVYTRVSSFVDWIEGI 364
             .|:|.|..|..:....||||||||    ..|.|.||.|.|...|: ||:|:||::.:|.||..:
  Rat   184 -FQVCVGLSTRLQTAYTGDSGGPLL----CAGVVHGIVSYGHPDAT-PPAVFTRIAPYVPWINTV 242

  Fly   365 V 365
            :
  Rat   243 L 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spiritNP_572492.1 CLIP 51..98 CDD:197829
Tryp_SPc 132..364 CDD:238113 81/258 (31%)
VchNP_058841.1 Tryp_SPc 21..242 CDD:238113 81/258 (31%)
Blue background indicates that the domain is not in the aligned region.

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