DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12111 and SFTPD

DIOPT Version :9

Sequence 1:NP_001259341.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_003010.4 Gene:SFTPD / 6441 HGNCID:10803 Length:375 Species:Homo sapiens


Alignment Length:128 Identity:38/128 - (29%)
Similarity:60/128 - (46%) Gaps:17/128 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 IGDNYY----YIEPMNKVNWFQAAGACRMMNAHLASIEDKPEMEALIKYMKAKGFKNNDYFWISG 111
            :|:..:    :::|..     :|...|......|||.....|..||.:.:.||    |:..::|.
Human   260 VGEKIFKTAGFVKPFT-----EAQLLCTQAGGQLASPRSAAENAALQQLVVAK----NEAAFLSM 315

  Fly   112 NDLGTEGAFYWMSNGRPMTYAPWNGPKQMPDNYGGNENCVHMFATREMINDANCKIQMLYVCE 174
            .|..|||.|.: ..|..:.|:.| .|.: |::.||:|:||.:| |....||..|..:.|.|||
Human   316 TDSKTEGKFTY-PTGESLVYSNW-APGE-PNDDGGSEDCVEIF-TNGKWNDRACGEKRLVVCE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_001259341.1 CLECT 55..174 CDD:153057 35/122 (29%)
SFTPDNP_003010.4 Collagen 46..98 CDD:189968
Collagen 130..201 CDD:189968
Surfac_D-trimer 224..269 CDD:286141 1/8 (13%)
CLECT_collectin_like 262..375 CDD:153061 37/126 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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