DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12111 and si:dkey-88n24.6

DIOPT Version :9

Sequence 1:NP_001259341.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_001314972.1 Gene:si:dkey-88n24.6 / 555551 ZFINID:ZDB-GENE-041014-88 Length:368 Species:Danio rerio


Alignment Length:100 Identity:28/100 - (28%)
Similarity:44/100 - (44%) Gaps:14/100 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 YYYIEPMNKVNWFQAAGACRMMNAHLASIEDKPEMEALIKYMKAKGFKNNDYFWISGNDLGTEGA 119
            |::|.. || ||.:|...||.....||::::..::..|.|....:|.:|   .||.   |...|.
Zfish    25 YHFINE-NK-NWTEAQRYCREKYTDLATVDNMNDLIQLKKSANNEGVQN---IWIG---LQRTGV 81

  Fly   120 FYW-MSNGRPMTYAPWNGPKQMPDNYGGNENCVHM 153
            :.| .|:|.|..:..|...:.     .|:|.|..|
Zfish    82 YKWYWSSGDPALFLNWASGEP-----AGSEECAVM 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_001259341.1 CLECT 55..174 CDD:153057 27/99 (27%)
si:dkey-88n24.6NP_001314972.1 CLECT_1 23..129 CDD:153072 27/99 (27%)
CLECT_1 136..247 CDD:153072
CLECT 253..365 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.