DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12111 and si:dkey-88n24.10

DIOPT Version :9

Sequence 1:NP_001259341.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_021333312.1 Gene:si:dkey-88n24.10 / 555408 ZFINID:ZDB-GENE-070424-265 Length:384 Species:Danio rerio


Alignment Length:175 Identity:39/175 - (22%)
Similarity:65/175 - (37%) Gaps:45/175 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DVNIFTNYRTEVYNGIPSEIDTTPFVRIGDNYYYIEPMNKV------------------NWFQAA 70
            |..:|.|:.    :|.|...|....||.|.  :.:.|.|.:                  ||..|.
Zfish    99 DPVLFLNWA----SGQPVNSDNCAVVRNGQ--WTVWPCNAISSFICSTSTGLVFVNQSMNWRAAQ 157

  Fly    71 GACRMMNAHLASIEDKPEMEALIKYMKAKGFKNNDYFWISGNDLGTEGAF----YWMSNGRPMTY 131
            ..||..:..|.|:.::.|.:.|..::..:. .:....||        |.|    .| |:....::
Zfish   158 SYCRQNHIDLVSVRNQNESQQLENFINGRN-SSGSAVWI--------GLFRDTWQW-SDQSNSSF 212

  Fly   132 APWNGPKQMPDNYGGNENCVHMFATREMIN---DANCKIQMLYVC 173
            ..|:  ...||||..:|:|.  ..|::.:.   |.:|..|..:||
Zfish   213 RYWD--TTQPDNYKDHEDCT--VTTQKGLGQWADFSCDNQFPFVC 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_001259341.1 CLECT 55..174 CDD:153057 30/144 (21%)
si:dkey-88n24.10XP_021333312.1 CLECT 23..139 CDD:321932 11/45 (24%)
CLECT_1 144..254 CDD:153072 28/124 (23%)
CLECT 269..381 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.