DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12111 and Clec4a

DIOPT Version :9

Sequence 1:NP_001259341.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_001005899.2 Gene:Clec4a / 474143 RGDID:1359662 Length:240 Species:Rattus norvegicus


Alignment Length:145 Identity:37/145 - (25%)
Similarity:56/145 - (38%) Gaps:40/145 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PFVRIGDNYYYI----EPMNKVNWFQAAGACRMMNAHLASIEDKPEMEALIKYMKAKGFKNND-- 105
            ||   |.:.|::    ...:|.:|.::...|..|.|||..|..|.|.:.:      .|..|.|  
  Rat   113 PF---GSHCYWVTKHTSTYSKASWNESEKNCFSMGAHLLVIHSKEEQDFI------TGILNRDAA 168

  Fly   106 YF---WISGNDLGTEGAFYWMSNGRPMTYAPWNGP-----KQMPDNYGGNENCV---HMFATREM 159
            ||   |.||:     ..:.|:|.      .|:|..     |..|.:  .:|.||   |:.:....
  Rat   169 YFIGLWDSGH-----RQWQWVSQ------TPYNASATFWHKGEPSS--DDEKCVIINHLNSGWGW 220

  Fly   160 INDANCKIQMLYVCE 174
             ||..|..:...||:
  Rat   221 -NDIPCSGKQQSVCQ 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_001259341.1 CLECT 55..174 CDD:153057 33/135 (24%)
Clec4aNP_001005899.2 ITIM motif 5..10
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..38
CLECT_DC-SIGN_like 107..235 CDD:153060 37/145 (26%)
Mannose binding. /evidence=ECO:0000250|UniProtKB:Q9UMR7 200..202 0/1 (0%)
N-acetyl-D-glucosamine binding. /evidence=ECO:0000250|UniProtKB:Q9UMR7 211..213 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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